| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1727 |
|---|
| Symbol | |
|---|
| ID | 3964026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1864916 |
|---|
| End bp | 1865464 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637916550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_522987 |
|---|
| Protein GI | 89900516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG AGTCAGCCCC TACCCATTTG GATGTCAAGG TGTTTGCGCA AGCCGCGAGT
GCGATCACCG GACATGATTT GCTATCAAAA TACGAGCGAT TGACTAAGGA AACCCAGGGG
CAGGGTGTTG ATCGGCTAAT TAACTGGGCT GCGCGCGGCG AGTTGCGCCG CGACGAAGCG
GGCGCCGAGC AGATCTGGCT GCATTTGACG GTTGATGCCA GTCTGCCCCT GATTTGCCAG
CGTTGTCTGG GGCCGGTGGA TATTGCTGTA TGTGTTAGCC GGTCTTTCCG CTTTGTTGGA
AGTGAAGAAG CGGCTGAAGC ACAGGACGAG GAGGCCGACG AAGATGTGCT GGTTTTGAGC
CGTGACTTCA ACCTGGCTGA TCTGATCGAA GACGAGGTGT TGATGGCGTT GCCGGTGATT
CCCCGTCATG AAACATGTCC GGTGGCGCTT AAGCTGACGG CTGTAGATCC GGGTTTTGAG
TCAGAGTCCA CCGAAAAGGT CAATCCTTTC TCGGTGTTGG CCAAGCTCCG CAGCGGCAAA
GGCAGTTGA
|
|---|
| Protein sequence | MKQESAPTHL DVKVFAQAAS AITGHDLLSK YERLTKETQG QGVDRLINWA ARGELRRDEA
GAEQIWLHLT VDASLPLICQ RCLGPVDIAV CVSRSFRFVG SEEAAEAQDE EADEDVLVLS
RDFNLADLIE DEVLMALPVI PRHETCPVAL KLTAVDPGFE SESTEKVNPF SVLAKLRSGK
GS
|
|---|
| |