| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1681 |
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| Symbol | |
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| ID | 3960693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1811489 |
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| End bp | 1813108 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637916505 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_522942 |
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| Protein GI | 89900471 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.793322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG TTCTAGACCG CGACGACCAC GTCGAGCATG ACCACCACAG CCACGCACCC
ACCGGCTGGC GCCGCTGGGT GTACGCGACC AACCACAAGG ACATCGGTAC TTTGTACATG
TGTTTCAGCC TGACCATGCT GATGATTGGC GGCGTGCTGG CCCTGCTGAT TCGAGCTGAG
CTGTTTCAGC CCGGCCTGCA ACTGGTGAAT CCTGAGCTTT TCAACCAGCT CACCACCATG
CACGGCATCA TCATGGTGTT CGGCGCCATC ATGCCGGGCT TTGTGGGTTT TGCCAACTGG
ATGATTCCGC TGCAAATTGG CGCCTCGGAC ATGGCGTTTG CCCGCATGAA TAACTTCAGC
TTCTGGCTGA TGGTTCCTGC CGCTGTGATG CTGGTGAGTT CATTCTTCAT GCCGGGAGGC
GCGCCAGCAG CAGGCTGGAC GCTGTACGCG CCACTGACCC TGCAAATGGG CCCGAGCATG
GACGCCGGCA TTTTTGCCAT GCATTTATTG GGTGCGAGCT CCATCATGGG TTCCATCAAC
ATCATCGTGA CCGTGCTCAA CATGCGCGCC CCGGGCATGA CCTTGATGAA AATGCCGATG
TTTTCCTGGA CCTGGCTGAT TACGGCGTAT TTGCTGATCG CCGTGATGCC GGTGCTGGCC
GGCGCCATCA CCATGACCTT GACCGACCGC CATTTCGGTA CCAGCTTCTT CAACCCGGCC
GGTGGTGGCG ACCCGGTGAT GTACCAGCAC ATTTTCTGGT TCTTCGGTCA CCCGGAGGTC
TACATCATGA TCTTGCCGGC ATTTGGCATC ATCAGCCAGA TCGTGCCGGC GTTTGCGCGC
AAAAAATTGT TTGGCTACGC GTCCATGGTC TATGCCACTT CAAGCATTGC GATCCTGTCC
TTCATTGTGT GGGGACATCA CATGTTTTCC ACCGGCATGC CGGTGACCGG TCAGTTGTTT
TTCATGTATG CCACCATGCT GGTCGCCGTG CCGACGGCTG TGAAGATTTT CAACTGGGTG
GCCACGATGT GGCGGGGTTC CATGACCTTT GAGACCCCGA TGCTGTTTGC GGTGGGCTTC
ATCTTCGTCT TCACCATGGG TGGTTTTACC GGCCTGATTC TGGCCATGGC ACCGATTGAC
ATCCAGGTGC AGGACACTTA TTACGTGGTG GCCCATTTCC ACTACGTGCT GGTGGCCGGT
TCCTTGTTTG CCATGTTTGC CGGCTACTAC TACTGGTCAC CCAAGTGGAC TGGTGTCATG
TACAACGAAA CACGCGGCAA GATCCACTTC TGGTGGTCAC TGATTGCATT CAACGTCACT
TTCTTCCCGA TGCATTTTCT CGGGCTGGCC GGCATGCCGC GCCGCTATGC CGATTACCCG
ATGCAATTTG CCGATTTCAA TGCGGTGGCC TCGGTAGGTG CTTTCTTCTT TGGCTTTGCA
CAGGTCTTTT TCCTGCTCTT CATCGTGACC CCCACCATGA TGGGCAAAGG CCAAAAGGCG
CCGCAAAGGC CTTGGGAAGG CGCGGAAGGT CTGGAGTGGG AAGTGCCTTC GCCGGCACCG
TTCCACACCT TCGAGACGCC GCCCAAGCTG GATGCCACGG CAACCAAGGT TATTGCTTAG
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| Protein sequence | MSAVLDRDDH VEHDHHSHAP TGWRRWVYAT NHKDIGTLYM CFSLTMLMIG GVLALLIRAE
LFQPGLQLVN PELFNQLTTM HGIIMVFGAI MPGFVGFANW MIPLQIGASD MAFARMNNFS
FWLMVPAAVM LVSSFFMPGG APAAGWTLYA PLTLQMGPSM DAGIFAMHLL GASSIMGSIN
IIVTVLNMRA PGMTLMKMPM FSWTWLITAY LLIAVMPVLA GAITMTLTDR HFGTSFFNPA
GGGDPVMYQH IFWFFGHPEV YIMILPAFGI ISQIVPAFAR KKLFGYASMV YATSSIAILS
FIVWGHHMFS TGMPVTGQLF FMYATMLVAV PTAVKIFNWV ATMWRGSMTF ETPMLFAVGF
IFVFTMGGFT GLILAMAPID IQVQDTYYVV AHFHYVLVAG SLFAMFAGYY YWSPKWTGVM
YNETRGKIHF WWSLIAFNVT FFPMHFLGLA GMPRRYADYP MQFADFNAVA SVGAFFFGFA
QVFFLLFIVT PTMMGKGQKA PQRPWEGAEG LEWEVPSPAP FHTFETPPKL DATATKVIA
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