| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1665 |
|---|
| Symbol | |
|---|
| ID | 3960414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1795240 |
|---|
| End bp | 1797909 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637916489 |
|---|
| Product | ATPase, E1-E2 type |
|---|
| Protein accession | YP_522926 |
|---|
| Protein GI | 89900455 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG AAGCACCTCC GGTTACCAAG GATAACTGGC ACCTGCATGA TGCCCAGGAG
TTAGCCCGCC ATCACGGGGT GGACCCGGCG CATGGCCTGC ATGAGGACGA GGCCAGCCGC
CGTGCGCAAC AGCACGGCCC GAATGAAATC CAGGGGCGGC CGGGACGCAG TCTTTGGGGC
CAGTTTATTG ACCAATTCAA GGATTTCATG GTGCTGGTAC TGATCGGCGC CGCCGTGATC
TCGGGCGTCA TCGGCGATCT GGTTGATACG CTGGCGATTC TGGTGATCGT GCTGCTCAAT
GCCGCCATCG GATTTGTGCA GGCGTGGCGA GCTGACAAAG CCATGGCGGC GCTCCAGCAA
CTGGCCGCCA CCCAGGCCAC CGTCTTGCGC AGTGGGCAGG CCCAGGTGGT CCCGGCCAGT
GAATTGGTGC CCGGTGATAT TGTGTTGCTG GAGGCTGGCA ACCAGGTGCC GGCGGATCTG
CGCTTGATCG AGATTGCCCA ACTCAAGGTG GATGAATCGG CGCTGACCGG CGAGTCGGTC
ACGGTGGCAA AACACACCTC CACATTGAAT GGTGTCGCCC ATCCGCTGGG CGACCGTCTC
AACATGGCCT TCAAGGGCAC CACGGCCACC TACGGCCGCG GACGCGGTCT GGTGGTCGCC
ACCGGCATGG CAACCGAACT GGGCAAGGTG GCCAGGTTGC TGGACCGCGA CACCGACCGC
AGCACGCCGC TGCAGCTGCG CCTGGCGGCT TTCGGCAAAC GGCTGGCGCT GGCGGTCATC
GCCATCTGCG GGGTGATTTT TCTGGTCGGG GTGATGCGCG GCGAAGATCC GATGCTGATG
ATCCTGACCG CCGTGAGCCT GGCCGTGGCC GCCATTCCCG AGGCCTTGCC TGCGGTGGTG
ACGGTGTTGC TGGCGCTGGG CGCGCGTCGC ATGGTGTCGC TCAATGCCCT GATCCGCCGT
TTGCCCTCGG TCGAGACGCT GGGTTCGGTC ACCTTCATCT GCTCAGACAA GACCGGCACC
CTGACGCAGA ACCACATGCA CGCAGAACTG CTGCTGGCCG ATGGGCAGGA GTGGGTGCCG
GGAAGCGGCG CCCCGGGTCG CGAGCCTGCC GGGCCGCTCC ATCTGGAGCT GTTGCGTGCG
GCAGCCTTGT GCAACGACGC CAGCCGCAAC CGCGAAGGGC GGTGGCAGGG CGACCCGACC
GAAACCGCGC TCACGCAAGT GGCGCTGGAG GCCGGGCTCG ACAAAGCCGA GTTGGAGCGC
CAGTTTGAAC GGGTACAGGA ACTGCCGTTC GACTCGGAGC GCAAGCGCAT GAGCACCGTG
CATCGATCGG AGACCGGCTT GTTGGCCTAC ACCAAGGGTG CGCCCGAATC GGTGATTCCC
CTGTGCAGCG CGCAATGGCG TGTGGAGGGT GCGGTGCCGC TGCAGCAAGA GGCCATGCTG
GCGGCCGCCG AGGCCATGGC GGCCCGGGGC TTGCGCGTGC TGGCGCTGGC CTGTCGCGCA
CATGCGATGC TGCCCGCGCC CGGAGAAGTC GAGTCGCTGG AGTCCGGCCT GAGCCTGATC
GGGCTGGTGG GTTTGATCGA TCCGCCGCGC CCGGAGGCGG CGCTCGCCGT GCACGACTGC
CAAACGGCAG GCATCACGCC GGTGATGATC ACCGGCGACC ACCCGGCCAC GGCGCTGGCG
ATTGCGCGGC GTCTGGGCAT CGTCGTGGAT GGCTCCGCTG AGGTGCTGAC CGGCCTTGAG
TTGGCTTCCA TCGATGAAGC GGCTTTGCGC GAGCGCGTGG CTTCCGTGCG GGTCTACGCA
CGGGTCGATC CGGCGCAGAA GATTCGCATT GTCGAAGCCT TGCAGGCGCG CGGCGAGTTC
GTCGCCATGA CGGGCGACGG CGTGAACGAC GCACCGGCCC TCAAGCGGGC CGATATCGGC
GTGGCCATGG GCCGTGGCGG CACCGATGTG GCGCGCGAGG CGGCGAGTCT GGTCCTGCTG
GACGACAACT TTGCCACCAT CGTTGCCGCC GTGCGGGAAG GCAGGCGCAT TTACGACAAC
ATCCGGAAAT TTGTCCGCTA TGCCATGACC GGCAATTCGG GCGAAATCTG GACCATCTTT
CTGGCCCCGA TGCTGGGCTT GCCCATCCCG CTGCTGCCCA TTCACATCCT CTGGGTCAAC
CTGGTGACCG ACGGCCTGCC GGGCCTGGCG CTGGCGGCCG AGCCGGCGGA ACGCGGCATC
ATGCAGCGCC CGCCGCGCGC GCCGCAGGAG AGCCTGTTCG TCAACGGGCT GTGGCAGCAC
ATTTTGTGGG TTGGTTTGCT GCTTGGTGGT TTATGTCTGC TGGTGCAAGC CTGGGCGATG
TCCACCGGCC ATGCGCACTG GCAGACCATG GTGTTTACCG TGTTGACGCT GGGGCAAATG
GCGCATGTGC TGGCGATCCG CTCGGAGACC GAGTCACTGT GGCGCCTCGG CCTGGGCTCG
AACCGGCCGC TGCTGGGCGC TGTGCTGCTG ACTTTCGTGC TGCAAATGGC CACGATTTAC
GTGCCGGTGC TGAACCCGAT TTTCAAGACA CAGGCCCTGA GTCCGGTGGA GCTGATGTTA
TGTCTCGCGG CGTCCGCTGT GGTCTTCATC GCAGTCGAGA TCGAGAAGCT CTGGCTGCGG
CACAAGCGCC CCACTCTCGC AGCGTCGTGA
|
|---|
| Protein sequence | MAQEAPPVTK DNWHLHDAQE LARHHGVDPA HGLHEDEASR RAQQHGPNEI QGRPGRSLWG
QFIDQFKDFM VLVLIGAAVI SGVIGDLVDT LAILVIVLLN AAIGFVQAWR ADKAMAALQQ
LAATQATVLR SGQAQVVPAS ELVPGDIVLL EAGNQVPADL RLIEIAQLKV DESALTGESV
TVAKHTSTLN GVAHPLGDRL NMAFKGTTAT YGRGRGLVVA TGMATELGKV ARLLDRDTDR
STPLQLRLAA FGKRLALAVI AICGVIFLVG VMRGEDPMLM ILTAVSLAVA AIPEALPAVV
TVLLALGARR MVSLNALIRR LPSVETLGSV TFICSDKTGT LTQNHMHAEL LLADGQEWVP
GSGAPGREPA GPLHLELLRA AALCNDASRN REGRWQGDPT ETALTQVALE AGLDKAELER
QFERVQELPF DSERKRMSTV HRSETGLLAY TKGAPESVIP LCSAQWRVEG AVPLQQEAML
AAAEAMAARG LRVLALACRA HAMLPAPGEV ESLESGLSLI GLVGLIDPPR PEAALAVHDC
QTAGITPVMI TGDHPATALA IARRLGIVVD GSAEVLTGLE LASIDEAALR ERVASVRVYA
RVDPAQKIRI VEALQARGEF VAMTGDGVND APALKRADIG VAMGRGGTDV AREAASLVLL
DDNFATIVAA VREGRRIYDN IRKFVRYAMT GNSGEIWTIF LAPMLGLPIP LLPIHILWVN
LVTDGLPGLA LAAEPAERGI MQRPPRAPQE SLFVNGLWQH ILWVGLLLGG LCLLVQAWAM
STGHAHWQTM VFTVLTLGQM AHVLAIRSET ESLWRLGLGS NRPLLGAVLL TFVLQMATIY
VPVLNPIFKT QALSPVELML CLAASAVVFI AVEIEKLWLR HKRPTLAAS
|
|---|
| |