| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1661 |
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| Symbol | |
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| ID | 3960410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1792838 |
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| End bp | 1793509 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916485 |
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| Product | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 |
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| Protein accession | YP_522922 |
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| Protein GI | 89900451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.139555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTCG TCGCTTTTGA GCGCGCCAAG CAGGGCACGG GTGCGAGCCG CCGTCTCCGC
ATCACCGGTC GCACACCGGG TATTGTTTAT GGTGGTGGCG CTGAGCCACA ACAGATCGAG
ATCGATCACA ATGCCCTCTG GCATGCCTTG AAAAAAGAGG CATTCCACGC CGCCGTTCTG
GATATGGAGC TGGACGGAAA AGACAATAAG GTTTTGCTGC GTGACGTGCA AATGCACCCG
TTCAAGCAGC TCATCCTGCA CGTTGACTTC CAGCGCGTCG ATGCCAGTAC CCGACTGCAC
ATGAAAGTGC CGTTGCACTA CAGCGGCGAT GAAAACTCGC CCGCCGTCAA GACCGAAGGC
TGCATTGCCA ATCACGTGAT CACCGAAATC GAAGTGTTGT GCCTGCCGAC TGATCTGCCT
GAATTCATCG CCGTGGATTT GAGTGGCCTG AAAAAAGGTG CCTCTCTGCA TTTGGCCGAT
GTCGCACTGC CCAAGGGCGT GACCGCCGTG ACACGCGGCA ACAAAAACCC GGTTCTGGTA
TCGGTGGTGG TTATTGGTGC CGCAGAGGCG CCGGTTGCCG AAGCTGGCGC GGCACCAGTT
GCTGCTGCTG CACCCGCAGC AGCTGGCAAG GCGGCGCCTG CAGCCAAAGC ACCAGCAGCC
AAGAAGAAGT AA
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| Protein sequence | MKFVAFERAK QGTGASRRLR ITGRTPGIVY GGGAEPQQIE IDHNALWHAL KKEAFHAAVL
DMELDGKDNK VLLRDVQMHP FKQLILHVDF QRVDASTRLH MKVPLHYSGD ENSPAVKTEG
CIANHVITEI EVLCLPTDLP EFIAVDLSGL KKGASLHLAD VALPKGVTAV TRGNKNPVLV
SVVVIGAAEA PVAEAGAAPV AAAAPAAAGK AAPAAKAPAA KKK
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