Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1659 |
Symbol | ipk |
ID | 3962778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1790693 |
End bp | 1791556 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916482 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_522920 |
Protein GI | 89900449 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTCAC TCTACGATAT TTGCGCCCCG GCCAAGCTCA ACCTGTTTTT GCACATCACA GGCAGGAGAA GCGATGGCTA TCATTTGCTG CAGTCGGTCT TCATGCTGAT TGATTGGTGC GACACACTGC ATTTTGACCT GCGTGTCGAT GGACAAATCA GCCGCGAGGA TCTTGCGACG CCCTTGCCGT TTGACGACCT TGTTGTCCGC GCTGCGCGGG CTCTGAAGGC TGCCAGCGGC AGTCCATTGG GCGTTCATGT CGGGATCGAA AAATGCATTC CCGCGCAAGC GGGCATGGGC GGTGGATCTT CCGATGCGGC GTCGACCCTG TTGGCATTGA ACCATCTGTG GCGGCTCAAC TTTTCACTCG AAAAGCTAAT CAGCATCGGG CTGCAACTGG GTGCCGATGT CCCGTTTTTT CTGGGTGGTC ACAACGCCTG GGTTGAAGGA ATCGGTGAGA AAATGGACCC TGTTGTCCTG CCCTCAGGTC GCTTTTTGGT GGTCAAGCCC GTAGAGGGGC TCGAAACAAG ATTAATTTTC TCGGATCCGG CTCTCAAAAG GGACAGTGAA ACAGCTATAA TTTCAGGCTT CGCTGCAAAT GCATTCGGTT TTGGTCGTAA CGACCTGCAG AGTGTTGCCC AAAGACTTTG TCCCGGCGTG ACCCAAGCCC TTGAGTGGCT TGCATCGCGT GGACTCAGTG GTCGGATGAC AGGCTCTGGA AGCGCGGTGT TTGCACAAAC GTTGCAAGAT GTTGATCTGA GAGGCGCTCC AAGCGGGTTT CAGGTCAGGT TGTGTAAGAG TTTGGATGTT CATCCCTTGG TGGGTTGGGC AGTCAGCGAC AGGTTGTCGG TTGGGAGCGC TTAG
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Protein sequence | MKSLYDICAP AKLNLFLHIT GRRSDGYHLL QSVFMLIDWC DTLHFDLRVD GQISREDLAT PLPFDDLVVR AARALKAASG SPLGVHVGIE KCIPAQAGMG GGSSDAASTL LALNHLWRLN FSLEKLISIG LQLGADVPFF LGGHNAWVEG IGEKMDPVVL PSGRFLVVKP VEGLETRLIF SDPALKRDSE TAIISGFAAN AFGFGRNDLQ SVAQRLCPGV TQALEWLASR GLSGRMTGSG SAVFAQTLQD VDLRGAPSGF QVRLCKSLDV HPLVGWAVSD RLSVGSA
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