Gene Rfer_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1659 
Symbolipk 
ID3962778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1790693 
End bp1791556 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID637916482 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_522920 
Protein GI89900449 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTCAC TCTACGATAT TTGCGCCCCG GCCAAGCTCA ACCTGTTTTT GCACATCACA 
GGCAGGAGAA GCGATGGCTA TCATTTGCTG CAGTCGGTCT TCATGCTGAT TGATTGGTGC
GACACACTGC ATTTTGACCT GCGTGTCGAT GGACAAATCA GCCGCGAGGA TCTTGCGACG
CCCTTGCCGT TTGACGACCT TGTTGTCCGC GCTGCGCGGG CTCTGAAGGC TGCCAGCGGC
AGTCCATTGG GCGTTCATGT CGGGATCGAA AAATGCATTC CCGCGCAAGC GGGCATGGGC
GGTGGATCTT CCGATGCGGC GTCGACCCTG TTGGCATTGA ACCATCTGTG GCGGCTCAAC
TTTTCACTCG AAAAGCTAAT CAGCATCGGG CTGCAACTGG GTGCCGATGT CCCGTTTTTT
CTGGGTGGTC ACAACGCCTG GGTTGAAGGA ATCGGTGAGA AAATGGACCC TGTTGTCCTG
CCCTCAGGTC GCTTTTTGGT GGTCAAGCCC GTAGAGGGGC TCGAAACAAG ATTAATTTTC
TCGGATCCGG CTCTCAAAAG GGACAGTGAA ACAGCTATAA TTTCAGGCTT CGCTGCAAAT
GCATTCGGTT TTGGTCGTAA CGACCTGCAG AGTGTTGCCC AAAGACTTTG TCCCGGCGTG
ACCCAAGCCC TTGAGTGGCT TGCATCGCGT GGACTCAGTG GTCGGATGAC AGGCTCTGGA
AGCGCGGTGT TTGCACAAAC GTTGCAAGAT GTTGATCTGA GAGGCGCTCC AAGCGGGTTT
CAGGTCAGGT TGTGTAAGAG TTTGGATGTT CATCCCTTGG TGGGTTGGGC AGTCAGCGAC
AGGTTGTCGG TTGGGAGCGC TTAG
 
Protein sequence
MKSLYDICAP AKLNLFLHIT GRRSDGYHLL QSVFMLIDWC DTLHFDLRVD GQISREDLAT 
PLPFDDLVVR AARALKAASG SPLGVHVGIE KCIPAQAGMG GGSSDAASTL LALNHLWRLN
FSLEKLISIG LQLGADVPFF LGGHNAWVEG IGEKMDPVVL PSGRFLVVKP VEGLETRLIF
SDPALKRDSE TAIISGFAAN AFGFGRNDLQ SVAQRLCPGV TQALEWLASR GLSGRMTGSG
SAVFAQTLQD VDLRGAPSGF QVRLCKSLDV HPLVGWAVSD RLSVGSA