| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1651 |
|---|
| Symbol | ppnK |
|---|
| ID | 3962770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1781060 |
|---|
| End bp | 1781956 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637916474 |
|---|
| Product | NAD(+)/NADH kinase family protein |
|---|
| Protein accession | YP_522912 |
|---|
| Protein GI | 89900441 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.105713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAA AATTCCGGCA CGTGGCGCTG ATAGGCAAAT ACCAGACGGT GGCATCGGGC
GCATCAGGCG CGTCCTCACG TCGGGTGCTG GAAGACATTG CCCATTTTTT GGGTGCGCAG
GGTTGCGAGG TGGTTTTTGA GCATGACACC GCGCACAACA TGGGCATTTC CGGCTACCCG
GTACTGGATG TCGACGCCAT CGGCGCGAAA TGTGATCTTG GCTTGGTGGT GGGCGGCGAC
GGCACCATGC TCGGCATTGG CCGCCAACTC GCCAAGTTTG GCGTGCCCCT GATTGGTATC
AACCAGGGGC GGCTGGGGTT CATCACCGAC ATCCCGCTGG ACGGTTATGC GTCCGCGCTG
GCGCCGATGC TGCGCGGTGA GTTTGAAGAA GATCATCGCA GCCTGATGCA CGCCAGGGTG
ATGCGTGACG GGCGCTGTGT TTATGACGCG CTGGCGATGA ACGATGTGGT GGTGAACCGG
GCGGCTACCT CCGGGATGGT GGAGTTGCGG GTTGAAGTCG ATGGCCACTT TGTGGCGAAT
CAGCGCGCCG ACGGCCTGAT CATTGCCACA CCGACCGGCT CCACCGCGTA TTCGCTGTCA
GCCGGCGGGC CGCTGCTGCA CCCTTCGATT CCGGGCTGGG TGTTGGTGCC CATTGCACCA
CATACCTTGT CAAATAGGCC CATAGTCCTC GCCAACATTA CAGAGATTGC TATCGAAATA
ATATCAGGAC GGGATGCCAG CGCCAGTTTT GACACGCAAT CGCTGGCCTC GCTGCTGCGA
GGGGACCGCA TCGTGGTGAC ACGCTCCGAA CACAATGTGC GCTTTTTGCA CCCCAGAGGC
TGGTCCTACT TTGACACCCT GCGCCAAAAA TTACACTGGA ATGAAGGAGT GGCCTGA
|
|---|
| Protein sequence | MKSKFRHVAL IGKYQTVASG ASGASSRRVL EDIAHFLGAQ GCEVVFEHDT AHNMGISGYP
VLDVDAIGAK CDLGLVVGGD GTMLGIGRQL AKFGVPLIGI NQGRLGFITD IPLDGYASAL
APMLRGEFEE DHRSLMHARV MRDGRCVYDA LAMNDVVVNR AATSGMVELR VEVDGHFVAN
QRADGLIIAT PTGSTAYSLS AGGPLLHPSI PGWVLVPIAP HTLSNRPIVL ANITEIAIEI
ISGRDASASF DTQSLASLLR GDRIVVTRSE HNVRFLHPRG WSYFDTLRQK LHWNEGVA
|
|---|
| |