Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1648 |
Symbol | |
ID | 3962767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1778218 |
End bp | 1778904 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637916471 |
Product | hypothetical protein |
Protein accession | YP_522909 |
Protein GI | 89900438 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0405293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCACCC CCCTCGCCCC CTCAACGCCC TCGCCTGTCC TGACCCCGAT CGAGGCGCGT GTGCTCGGCA CCCTGATGGA AAAAGCCCGC ACCGTGCCTG ACAGCTACCC GCTCACGCTC AACACGCTGC TGCTGGGCTG CAACCAGAAG TCCAGCCGCG AGCCGCTGAT GGAATTGACC GAAGCCGACG TGGCCGCTGC CCTGAACACG CTGAAAGAAG CCCATCTGGT GCGCGAAAGC AGTGGCTCGC GCACCACACG CTTTGAACAC AATTTTCAAC GCGGCATCGG GGTCTACGAA CAGGCCGCGG TGCTGCTGGG ACTGTTGATG CTGCGCGGCC CTCAAACGGC GGGTGAGCTG CGCCTGAACA CCGAACGCTG GTACAAATTT GCCGACATTT CCTCGGTCGA GGGCTTTCTG GAAGAGTTGC AGGACCGCTC CGCTGAAAAA GGGGGGCCGC TGGTGGTCAA ACTGGCGCGT GGACCCGGCA CTCGGGAGCA ACGCTGGGCC CACCTGCTGT GCGGCCCGGT GGATGCGACG CAAACCGGGC TTGGCCGCTC GTCTGAAGGC CTGCCCGGCA ACACCGCCGA ACGCCTGGAA CGACTCGAAT CGGAACTGGC CAACTTGCGT GAAACGGTGC AAAAGCTGTG CGCCGAGTTG GGCGTTTCTC CTCCTGAACA GGTCTAG
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Protein sequence | MITPLAPSTP SPVLTPIEAR VLGTLMEKAR TVPDSYPLTL NTLLLGCNQK SSREPLMELT EADVAAALNT LKEAHLVRES SGSRTTRFEH NFQRGIGVYE QAAVLLGLLM LRGPQTAGEL RLNTERWYKF ADISSVEGFL EELQDRSAEK GGPLVVKLAR GPGTREQRWA HLLCGPVDAT QTGLGRSSEG LPGNTAERLE RLESELANLR ETVQKLCAEL GVSPPEQV
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