Gene Rfer_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1648 
Symbol 
ID3962767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1778218 
End bp1778904 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID637916471 
Producthypothetical protein 
Protein accessionYP_522909 
Protein GI89900438 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0405293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCACCC CCCTCGCCCC CTCAACGCCC TCGCCTGTCC TGACCCCGAT CGAGGCGCGT 
GTGCTCGGCA CCCTGATGGA AAAAGCCCGC ACCGTGCCTG ACAGCTACCC GCTCACGCTC
AACACGCTGC TGCTGGGCTG CAACCAGAAG TCCAGCCGCG AGCCGCTGAT GGAATTGACC
GAAGCCGACG TGGCCGCTGC CCTGAACACG CTGAAAGAAG CCCATCTGGT GCGCGAAAGC
AGTGGCTCGC GCACCACACG CTTTGAACAC AATTTTCAAC GCGGCATCGG GGTCTACGAA
CAGGCCGCGG TGCTGCTGGG ACTGTTGATG CTGCGCGGCC CTCAAACGGC GGGTGAGCTG
CGCCTGAACA CCGAACGCTG GTACAAATTT GCCGACATTT CCTCGGTCGA GGGCTTTCTG
GAAGAGTTGC AGGACCGCTC CGCTGAAAAA GGGGGGCCGC TGGTGGTCAA ACTGGCGCGT
GGACCCGGCA CTCGGGAGCA ACGCTGGGCC CACCTGCTGT GCGGCCCGGT GGATGCGACG
CAAACCGGGC TTGGCCGCTC GTCTGAAGGC CTGCCCGGCA ACACCGCCGA ACGCCTGGAA
CGACTCGAAT CGGAACTGGC CAACTTGCGT GAAACGGTGC AAAAGCTGTG CGCCGAGTTG
GGCGTTTCTC CTCCTGAACA GGTCTAG
 
Protein sequence
MITPLAPSTP SPVLTPIEAR VLGTLMEKAR TVPDSYPLTL NTLLLGCNQK SSREPLMELT 
EADVAAALNT LKEAHLVRES SGSRTTRFEH NFQRGIGVYE QAAVLLGLLM LRGPQTAGEL
RLNTERWYKF ADISSVEGFL EELQDRSAEK GGPLVVKLAR GPGTREQRWA HLLCGPVDAT
QTGLGRSSEG LPGNTAERLE RLESELANLR ETVQKLCAEL GVSPPEQV