Gene Rfer_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1612 
Symbol 
ID3960476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1743166 
End bp1744236 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content64% 
IMG OID637916436 
ProductUbiE/COQ5 methyltransferase 
Protein accessionYP_522874 
Protein GI89900403 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTC AAACCAGCAC CCACAACCTC GTCCAGGACT ACTATGGTCA CCAGTTGCAA 
GGCACGGCAG ACCTCAAAAC CAGTGCCTGC TGCGACGCCA GCACCATGCC CGAGTGGCTC
AAGCCGCTGC TCGCGCGTGT GCACCCCGAG GTGCTGTCGC GCTACTACGG CTGCGGCCTG
GTGTGCCCGC CGCTGCTCGA GGGCTGCCGT GTGCTCGATC TGGGCTGCGG CTCGGGCCGC
GACGTCTATG CGCTGGCACA ACTGGTCGGC CCCGAGGGTG AAGTGGTCGG TGTGGACATG
ACCGACGAAC AGCTGGCCGT GGCGCGCGCC CATCAGGCCC ACCACACGGA GGTCTTTGGC
TACAGCAACA CAAGGTTTTT GCATGGCTAC ATCGAGCGGC TCGATGAGCT GGGTCTGGAG
CCCGCCAGCT TCGACGTGAT CGTGTCCAAC TGCGTTGTCA ATCTTTCGCC CGACAAGGAC
GCGGTGCTGG CCGGTGTGCA GCGCCTGCTC AAACCGGGCG GCGAATTTTA TTTCTCTGAC
GTGTATGCCG ACCGCCGCGT GCCACCGGCC GTGCGCAACG ACCCGGTGCT GTATGGCGAG
TGCCTGGGTG GCGCGCTTTA CTGGAACGAC TTCATTCAAT TGGCCCAGCG CCACGGCTTT
GCCGACCCGC GCCTGCTTGA AGACCGCCCG CTTGAGATTA CCGACCCGAA GCTCGCCGCG
CGCACCGGCA ACCTGCGCTT CTTCTCGGCC ACCTATCGCC TGTTCAAACT GGCCGCGCTG
GAGTCTGCCT GCGAAGACTT CGGCCAGGCC GTCATCTACC AAGGCAGCAT CCCCGAGCAC
CCGGGCCGCT TTGTGCTCGA CAAACACCAC GACATGCAAA CCGGCAAGGT GTTTGCGGTC
TGCGGCAACA CTTGGCACAT GCTGCAGGGC ACCCGCTTTG CGCCGCACTT CAACTTCATC
GGCAACTTCG ACACCCACTA CGGAATTTTT GACGGCTGTG GCGGCAATCT GCCGTTTGGG
GCTCGCAGCG AAAGTAGCTC CGGCGTCTGC GGACTGGCGG CTTGCTGCTG A
 
Protein sequence
MPIQTSTHNL VQDYYGHQLQ GTADLKTSAC CDASTMPEWL KPLLARVHPE VLSRYYGCGL 
VCPPLLEGCR VLDLGCGSGR DVYALAQLVG PEGEVVGVDM TDEQLAVARA HQAHHTEVFG
YSNTRFLHGY IERLDELGLE PASFDVIVSN CVVNLSPDKD AVLAGVQRLL KPGGEFYFSD
VYADRRVPPA VRNDPVLYGE CLGGALYWND FIQLAQRHGF ADPRLLEDRP LEITDPKLAA
RTGNLRFFSA TYRLFKLAAL ESACEDFGQA VIYQGSIPEH PGRFVLDKHH DMQTGKVFAV
CGNTWHMLQG TRFAPHFNFI GNFDTHYGIF DGCGGNLPFG ARSESSSGVC GLAACC