Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1561 |
Symbol | |
ID | 3963268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1687197 |
End bp | 1688219 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916384 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_522824 |
Protein GI | 89900353 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTA TCGTCGTGAC CGGAGCTGCC GGTTTTATTG GCAGCAACAT CATTCAGGGG CTCAACGCCC GCGGTTTGAA TGACATCATC GCCATCGACG ACCTGACGCA AGGCGACAAG TTTCGCAACC TCGCCCATCT CAAGATTTCA GACTATGTAG ACGCGAGCGT GTTCTACGAT CTGTTTGCCA ACGGCGCCTA TGGCCAGATC GAGGCCGTGT TTCATGAGGG CGCCTGCAGC GACACCATGG AAAGCAATGG CAAGTACATG ATGGACAACA ACTATGCGAC CTCTGTGAAC TTGTTCCAGG CCTGCCAGAA GCGCGGAGCG CGCTTGCTGT ATGCATCGAG CGCCGCTACG TACGGTGGCT CGGACACGTT CCGGGAAGAC CCAGCCTTTG AGCGTCCTCT GAATGTATAT GGCTATTCCA AGCTGCTGTT TGATCAGCGT ATGCGACGTG AGTGCGGCAA CGACTTTCGG CGCTCGGTTG CCGGCAAGAC GGGCCAGGTA GTGGGTTTTC GCTACTTCAA TGTCTATGGG CCGCACGAGC AACACAAAGG CCGCATGGCC AGCGTCGCCT TTCATCAGTT TCACCAGTTT CAGGCTGAGG GCAAGGTCAA GCTGTTTGCT GACTACGGCG GCTATGCCGC AGGAGCACAG ATGCGTGACT TCATCTTTAT TGACGACGTG GTAGCGGTGA ACCTGTGGTT CTTTGACCAC CCCGGCGTGT CCGGCATTTT CAATCTGGGC ACAGGCCGGG CGCAGCCCTT CAATGACGTG GCCAGCTCGG TTGTCAATGC ATTGCGTGGC CTCTCAGGCC AAACCGCACT CGGGCTTGAA GCCCTCACTG AAGCCGGTTT GATTGAGTAC ATCCCCTTCC CGGACGCCCT GCGTGGCAAG TACCAAAGCT ACACCCAGGC CGATTTGAGC GCCTTGCGTG CCACCGGCTG CGACCACCCA TTCGCCGATG TGCAGACCGG TGTGTCGAAC TATGTGCAAT GGCTGGCCCA GCAGGATTCT TGA
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Protein sequence | MTRIVVTGAA GFIGSNIIQG LNARGLNDII AIDDLTQGDK FRNLAHLKIS DYVDASVFYD LFANGAYGQI EAVFHEGACS DTMESNGKYM MDNNYATSVN LFQACQKRGA RLLYASSAAT YGGSDTFRED PAFERPLNVY GYSKLLFDQR MRRECGNDFR RSVAGKTGQV VGFRYFNVYG PHEQHKGRMA SVAFHQFHQF QAEGKVKLFA DYGGYAAGAQ MRDFIFIDDV VAVNLWFFDH PGVSGIFNLG TGRAQPFNDV ASSVVNALRG LSGQTALGLE ALTEAGLIEY IPFPDALRGK YQSYTQADLS ALRATGCDHP FADVQTGVSN YVQWLAQQDS
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