| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1539 |
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| Symbol | |
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| ID | 3960528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1656509 |
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| End bp | 1657201 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916358 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_522802 |
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| Protein GI | 89900331 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCG TTTACCTGGT TGATGATCAC CAGATCATGC GCGAAGGCTT GCGCGCCCTG
CTCGAGGCCA AGGGTCACAA GGTGGTGGGT GAGTCAGCCG ACCCGACCGA AGCCCTGGCA
GATTTGCTGC GCATGCGCCC CGAGGTGCTG CTGCTCGACC TGAATCTGGG TGAGCGCTCG
GGTTTCGAGT TGCTCGCTGA GCTGCAACGG CGCCACCTGC CGACGCGCTG CGTGGTGCTG
ACCATGTCGG CGCAGCCGCG CCAGGTGGCC GAGGCCTTGC GCATGGGCGC CAGCGGCTAT
GTGCTCAAGG GCTCAGCGGT CAGCGATCTG CTGAGCGCGG TTGACGCGGC GGTGCGTGGC
AAGAAACATC TGGGTGCCGA AGTGGCCGAC CTCGCGCTGC AGGTGTTTAC GCTCAAGGAC
GAAGATCCGT TAAGCACGCT GTCCCCGCGT GAACAACAAA TCATCATCAT GGTGGTCAAG
GGCGCTTCCA GCTCCCAAAT TGGCACTCAA CTGCATTTGT CGCCCAAAAC GGTCGCCACC
TACCGCAGTC GCCTGATGGC CAAGCTCGGT GTGCGCGACG TCCCGGGCCT GGTGCGACTG
GCCGTGCGCC ATAAGCTGAT CGATGCCGAC GAGTCAACCA ACCGTAGCCG CCGCGCCACG
GACGGGGCCC TAGGAAAAGT GGAACAGCAG TGA
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| Protein sequence | MTGVYLVDDH QIMREGLRAL LEAKGHKVVG ESADPTEALA DLLRMRPEVL LLDLNLGERS
GFELLAELQR RHLPTRCVVL TMSAQPRQVA EALRMGASGY VLKGSAVSDL LSAVDAAVRG
KKHLGAEVAD LALQVFTLKD EDPLSTLSPR EQQIIIMVVK GASSSQIGTQ LHLSPKTVAT
YRSRLMAKLG VRDVPGLVRL AVRHKLIDAD ESTNRSRRAT DGALGKVEQQ
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