Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1532 |
Symbol | |
ID | 3960686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1650348 |
End bp | 1650773 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916351 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_522795 |
Protein GI | 89900324 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.42595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATCA CCTACCGGGA GGAGGGCGAG GACGACGCCG TGCTGTCCGA GATCAACACC ACGCCATTGG TGGATGTGAT GCTGGTGCTG CTGATTATTT TTCTGATCAC CATTCCGGTC ATCAACACCT CGGTGGCCGT GCGCTTGCCC CGGGAGGCGA ACCAGTTGCA GCAGAGCCAG CCGCAAACCG TCGTGATCTC GGTCGATGCC CGTGGCGGCA CCTACTGGTT TGATGCCCGG CTGACTGACG CGCAAAGCCT GCAAGACAAG CTCACGCCAA TGGCCCGGCA AACCCCGCAG CCCGAGGTGC ACATTCGGGG CGACGCCCGC TCCGACTTTG AGGCCGTGGC GCGGGTGCTG TATGCCTGCC AGCAGGCCGG CATCACGCGC ATTGGCTTTG TGACGGAGCC GCCTCATGGC CATTGA
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Protein sequence | MAITYREEGE DDAVLSEINT TPLVDVMLVL LIIFLITIPV INTSVAVRLP REANQLQQSQ PQTVVISVDA RGGTYWFDAR LTDAQSLQDK LTPMARQTPQ PEVHIRGDAR SDFEAVARVL YACQQAGITR IGFVTEPPHG H
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