Gene Rfer_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1532 
Symbol 
ID3960686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1650348 
End bp1650773 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID637916351 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_522795 
Protein GI89900324 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.42595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA CCTACCGGGA GGAGGGCGAG GACGACGCCG TGCTGTCCGA GATCAACACC 
ACGCCATTGG TGGATGTGAT GCTGGTGCTG CTGATTATTT TTCTGATCAC CATTCCGGTC
ATCAACACCT CGGTGGCCGT GCGCTTGCCC CGGGAGGCGA ACCAGTTGCA GCAGAGCCAG
CCGCAAACCG TCGTGATCTC GGTCGATGCC CGTGGCGGCA CCTACTGGTT TGATGCCCGG
CTGACTGACG CGCAAAGCCT GCAAGACAAG CTCACGCCAA TGGCCCGGCA AACCCCGCAG
CCCGAGGTGC ACATTCGGGG CGACGCCCGC TCCGACTTTG AGGCCGTGGC GCGGGTGCTG
TATGCCTGCC AGCAGGCCGG CATCACGCGC ATTGGCTTTG TGACGGAGCC GCCTCATGGC
CATTGA
 
Protein sequence
MAITYREEGE DDAVLSEINT TPLVDVMLVL LIIFLITIPV INTSVAVRLP REANQLQQSQ 
PQTVVISVDA RGGTYWFDAR LTDAQSLQDK LTPMARQTPQ PEVHIRGDAR SDFEAVARVL
YACQQAGITR IGFVTEPPHG H