Gene Rfer_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1531 
Symbol 
ID3960685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1649442 
End bp1650344 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID637916350 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_522794 
Protein GI89900323 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAA AATTTCTCAT GACCCGACGC GCCCCGGTCT GGTTGCTCTC CTTCATGCTG 
GCATTCGCCG CCGTGGGTCT GGTCCAGGCG CAGCCCGTCG CGGCACCCGC AGTGCCCGTC
GCCGCCGGTG AAACGCCCAT GGCCGCCGCC TCGCCCGCCA TGGCGGTGCC CCCCATGGCC
ACACCGCTGC TCACCCCGCC CGCCAGCGAG TCTTTGGCCA ATCCTTACGG CATGCGCTCA
GTGTGGCAAC AAGGGGATCT GGTGGCCCGC ACGACGCTGC TGCTGCTGGC GCTCATGTCC
TTGCTCAGCT GGTACTTCAT CATCGCCAAG CTGCTGGCGC AGGGCCGCTT GAGCGCGCAG
GCGAAAGCAG CAAAGAAAGC CTTTGCCGTT GCGGACGCCT TGAACAAGCG CGTCGAAGGC
CTGGACAAGG CCAGCCCGTT TCGCTTCATC GCCGAGTCGG CGCTGGAGGC TGCACGCCGC
TACTACAGCT TGGCCGGCCA GGTTGACATG AACAGCTGGC TCAGTCAGGA CATCGTGCGC
TCGGTGGCGA CGCTGCAGAT GCGCAGCCAG GAAGGGCTGT CGGTGCTGGC CACCATCGGG
TCGACGGCGC CATTTGTTGG GCTGTTCGGC ACCGTCTGGG GCATTTACAA CGCGCTGGTG
ACGATCGGCG TTTCGGGCCA GGCATCGATC GAAAAAGTTG CCGGACCGGT GGGTGAGGCG
CTCATCATGA CGGCGCTGGG TTTGGCCGTG GCGGTGCCGG CGGTGCTGGG CTACAACTGG
CTGGTGCGGC GCAACCGGGT CACGCTGCAC GCGGTCAAGG GTTTTGGCTC CGAGTTGCAC
ACCCTGCTGC TGGTTGAAAT CGACAAAAGC CAGCGCGCCG GCGCTGCCAG CCAGGCGGCC
TGA
 
Protein sequence
MTPKFLMTRR APVWLLSFML AFAAVGLVQA QPVAAPAVPV AAGETPMAAA SPAMAVPPMA 
TPLLTPPASE SLANPYGMRS VWQQGDLVAR TTLLLLALMS LLSWYFIIAK LLAQGRLSAQ
AKAAKKAFAV ADALNKRVEG LDKASPFRFI AESALEAARR YYSLAGQVDM NSWLSQDIVR
SVATLQMRSQ EGLSVLATIG STAPFVGLFG TVWGIYNALV TIGVSGQASI EKVAGPVGEA
LIMTALGLAV AVPAVLGYNW LVRRNRVTLH AVKGFGSELH TLLLVEIDKS QRAGAASQAA