Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1525 |
Symbol | |
ID | 3960679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1641737 |
End bp | 1642504 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916344 |
Product | extracellular solute-binding protein |
Protein accession | YP_522788 |
Protein GI | 89900317 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.490796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TCCTCCTGGC TATCGCCATT GGATCGCTCT GCGCTGTCTC GTTTGCCCAA GGCAAAGACC TCAAGGTCGC CATCGACCCG ACTTACGAGC CCTTCACGTT CAAGACCGCC GACGGCAAGC CGACCGGCTT CGACGTCGAC ATCGCCAATG CGCTGTGCGA GCAGGTCAAG CGCAAATGTG TGTTCGTCGA GCAAGTCTGG GACAGCATGA TTCCGGGCCT GCAGGCCAAG AAATACGATG TCATCATCAG CTCGATGTCG ATCACCGCTG ACCGGCTCAA GGTGATTGAT TTCACCAACA AGTACTACAA CACACCGAGC CGCATCGTGG TGAAGAAAGA CGTCAAGTTC GATGGCCCGG CTTCGCTCAA GGGCAAAAAG CTCGGCGTTC TCAAGGGCAG CACGCAAGAA AAATACGCCA TGGGCGAACT CAAGACCGTG GGTGTGGAAG TGGTCCCCTA CGAAGCGCAG GACCAGGTTT ACCTGGACAT CAAGTCCGGT CGTCTGGACG GCACCGTGGC CGACTTTGTG GAAGTCACCG GTGGCTTCCT GAGCAAGCCC GAAGGGAAAG ACTACAACCT GGTCGGCCCA GAGCTCTACA CTGAAAAATA CTTTGGTACT GGCGTCGGCA TCGGCCTGCG CAAGGGTGAA ACAGCGCTCA AAAACGAATT GAATGCCGCC ATCAAGACGA TCCGTGCCAA TGGCACTTAC AAGAAAATCA ACGACAAATA CTTCAAGTTT GACGTTTACG GCAAGTAA
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Protein sequence | MKKLLLAIAI GSLCAVSFAQ GKDLKVAIDP TYEPFTFKTA DGKPTGFDVD IANALCEQVK RKCVFVEQVW DSMIPGLQAK KYDVIISSMS ITADRLKVID FTNKYYNTPS RIVVKKDVKF DGPASLKGKK LGVLKGSTQE KYAMGELKTV GVEVVPYEAQ DQVYLDIKSG RLDGTVADFV EVTGGFLSKP EGKDYNLVGP ELYTEKYFGT GVGIGLRKGE TALKNELNAA IKTIRANGTY KKINDKYFKF DVYGK
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