| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1504 |
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| Symbol | |
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| ID | 3961119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1616144 |
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| End bp | 1618159 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637916324 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_522768 |
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| Protein GI | 89900297 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0410124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA CCCTTTCCGC TTCAACGCTT CTCGCGGTGC CAATGGCGCC ATTGGCGGGG
GCTGTTCTGG CCGGCATTTT TGGTACCAAG TTTGGTGGCA ACTGGATCGG TCGACGCCTG
TCGCATTCGC TCACTATTCT GGGTGTTTTT ATTGCTTTCA TCCTGTCCGC CATGACACTC
AAAAGTGTGG CACTTGATGG TGCACGCTTC AATGAAACCA TTTACACCTG GATGGTGGTG
GGCGACATGA GGATGCAAAT CGGGTTTCTG GTGGATGGAC TCACGGCCAT GATGATGTGC
GTGGTGACTT TTGTGTCCCT GATGGTCCAC ATCTACACGA TTGGCTACAT GGAAGAAGAT
GAAGGCTATA ACCGCTTCTT TTCGTATATA TCGCTCTTTA CATTCTCAAT GCTGATGCTG
GTCATGAGCA ACAATCTTCT GCAGCTGTTC TTTGGCTGGG AGGGCGTTGG TTTGATGTCC
TATCTCCTTA TTGGCTTCTG GTTTAACAAG CCCACCGCGG TTTTCGCGAA CATGAAGGCT
TTTTTGGTAA ATCGCGTCGG TGACTTCGGA TTTATTTTGG GCATCGCATT GATCATTGCG
TTTACCGGAA CACTCAATTA CACAGAGATA TTCGCGCAGA AGGCTGAATT GGCCAAACTC
AGTTTCCCTG GTACCGAGTG GATGTTGGTG ACGGTAATCT GTATCTGCCT TTTTGTCGGT
GCCATGGCCA AGTCAGCTCA ATTTCCATTG CACGTCTGGC TGCCCGATTC CATGGAAGGT
CCAACCCCAA TCTCGGCTTT GATTCACGCT GCCACCATGG TTACTGCGGG TATTTTTATG
GTGGCGCGTA TGTCGCCTTT GTTTGAACTC AGCGACACTG CGTTGAACTT TGTGCTGGTG
ATCGGTGCCA TCACCGCCCT GTTCATGGGC CTGTTGGGTG TCATTCAGAA TGACATCAAG
CGCGTGGTTG CCTACTCCAC GCTGTCCCAG TTGGGCTATA TGACGGTGGC TCTGGGTGCA
TCTGCTTACT CGGTGGCGGT TTTTCACTTG ATGACACACG CTTTCTTCAA GGCGCTCCTG
TTCCTTGGCG CGGGCTCGGT CATTATGGGA ATGCACCACA ATCAGGACAT TCGCTGGATG
GGTGGGCTGC GCAAGTACAT GCCCATTACC TGGATCACAT CTTTGCTGGG GTCGCTCGCA
CTCATAGGAG CCCCCTTGTT TGCGGGTTTC TATTCCAAAG ACAGCATCAT TGAGGCCGTC
TATGAAAGTC ATCTGCCCGG TGCCGGTTTC GCAACATTCG CTGTGCTAGG AGGTGTGTTT
TTGACGGCGT TCTACTCCTT CCGCCTGTAT TTTCTGGTTT TCCATGGTGC CGAGCGCTAT
GACCAGAATC CAGACGCACA TCATGATGCT CATCATGGCC ATGGTAAAGA GGAGCACAAG
CCGCATGAAT CGCCCTGGGT TGTGACAGTG CCACTGATCC TGCTTGCGAT TCCCTCGGTT
GTGATTGGGT TCATGACCAT TGAGCCCATG TTGTACGGGG ATTTTTTCAA GGACTCGATC
TTCATTAATC TGGAAAAGCA CGCGGCCATG GAAGAAATGG CCAAGCTGTT CCACGGCCCG
GTGCAGATGG CTTTGCACGG GCTGATGACG ATGCCCTTCT GGCTGGCGCT TTTCGGTGTG
GCAAGTGCCT ACTACATGTA CATGGTCAAT CCGGCATTGC CAGCGGCGAT CAAGACTCGT
TTTCAGCCGA TCTACACCTT GCTTGAAAAT AAATACTACC TGGACTGGTT CAACGAAAAC
GTGATTTCGC GTGCCGCACG TGCCTTGGGT GTCGGGCTGT GGAAGGGCGG CGATGAAGCT
GTGATCGATG GCGCGCTGGT CAACGGCTCC TGGAAAGGAG TGGCTTGGGT ATCTGGCGTG
ATTCGCAGGG TGCAAACAGG TTACCTGTAC CACTATGCGC TGGTCATGAT ATTGGGTGTT
TTTGTGCTGA TGACGTATTT CGTCTGGCTC AAGTAG
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| Protein sequence | MSQTLSASTL LAVPMAPLAG AVLAGIFGTK FGGNWIGRRL SHSLTILGVF IAFILSAMTL
KSVALDGARF NETIYTWMVV GDMRMQIGFL VDGLTAMMMC VVTFVSLMVH IYTIGYMEED
EGYNRFFSYI SLFTFSMLML VMSNNLLQLF FGWEGVGLMS YLLIGFWFNK PTAVFANMKA
FLVNRVGDFG FILGIALIIA FTGTLNYTEI FAQKAELAKL SFPGTEWMLV TVICICLFVG
AMAKSAQFPL HVWLPDSMEG PTPISALIHA ATMVTAGIFM VARMSPLFEL SDTALNFVLV
IGAITALFMG LLGVIQNDIK RVVAYSTLSQ LGYMTVALGA SAYSVAVFHL MTHAFFKALL
FLGAGSVIMG MHHNQDIRWM GGLRKYMPIT WITSLLGSLA LIGAPLFAGF YSKDSIIEAV
YESHLPGAGF ATFAVLGGVF LTAFYSFRLY FLVFHGAERY DQNPDAHHDA HHGHGKEEHK
PHESPWVVTV PLILLAIPSV VIGFMTIEPM LYGDFFKDSI FINLEKHAAM EEMAKLFHGP
VQMALHGLMT MPFWLALFGV ASAYYMYMVN PALPAAIKTR FQPIYTLLEN KYYLDWFNEN
VISRAARALG VGLWKGGDEA VIDGALVNGS WKGVAWVSGV IRRVQTGYLY HYALVMILGV
FVLMTYFVWL K
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