| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1479 |
|---|
| Symbol | |
|---|
| ID | 3964304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1590184 |
|---|
| End bp | 1591293 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637916298 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_522743 |
|---|
| Protein GI | 89900272 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02483] phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.035174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACT CAATCCGGCG TATTGCCGTT AACACCGGCG GCGGTGACGC CCCCGGCCTC
AACGCCGTCA TCCAGTCGGT GATGATTGCC GCTGCCAACC GGGGCTGGGA GTGCTACGGC
ATCCGTGATG GTTTTAATGG CATCTTGTTT CCAGAGCGCT ACCCGCAAGG CGGCGTGGTC
CGGCTGACAC GCGACAAGGT GCGCGGCATC GGGCATCTGG GGGGCACCAT CCTGGGCACC
ACCAACAAAG GTGACCCTCT GCATTTTCCG ATCACACTGC CCGACGGGAG TACGCGGGAG
ATTGACCGCT CGGACGAAAT TTTGACCTAT TTCGCCACCC ACCAGATTGA CGCGTTGGTG
GCTATCGGCG GCGACGGCTC ACTCACCATT GCGAATGCAC TGCACCAGAA AGGCCTGCGT
GTGGTGGGCG TGCCCAAGAC CATCGACAAC GACCTGGACA AGACCTTTAC CACCTTCGGT
TTTGACACGG CGGTGGGCTT TGCCACCGAG TGCTTGGACC GCCTGCACAG TACGGCCGAG
AGCCACCAGC GCGTGATGGT GGTCGAAGTG ATGGGGCGCT ATGCCGGCTG GATCGCCCTG
CACTCGGGCA TTGCGGGCAA TGCGCACGTC ATTTTGATGC CCGAGATCAG CTTCGATCTG
GAGCAGGTGG CGGCCAAGAT TCGCGCGCGT GACGCCGAAG GGCGGCTGTA TTCCATTGTG
CTGGTGGCCG AAGGGGCGCA GCCGGGCGAC GGACACCGCG AGTTGGCGGC CCCGGCCGAG
GCGGGCCATG CCGAGCGTCT GGGTGGTATT GGCGAGCGTG TCGGCCGGGC GCTGGCCGAG
CGCACCGGCA AAGACACGCG TGTGGTGGTG CTGGGGCATT TGCTGCGCGG TGGCAGCCCG
ACCGCCTTCG ACCGGCTGGC GGCCCTGCGT TTTGGTGCGG CAGCGGTGCG CGCGCTGGAC
GAAGGGCAGT CCGGCATCAT GGTGTCTCTG GGCTTGACCG GCGTCGATTA CGTCGCGCTG
GAAGAAGTGG CGGGCCACAT GAAGGCGGTG CCGCTGGACA GTGACACGCT ACAAACCGGA
CGTGATCTGG GGATTTGTTT TGGCGATTGA
|
|---|
| Protein sequence | MTNSIRRIAV NTGGGDAPGL NAVIQSVMIA AANRGWECYG IRDGFNGILF PERYPQGGVV
RLTRDKVRGI GHLGGTILGT TNKGDPLHFP ITLPDGSTRE IDRSDEILTY FATHQIDALV
AIGGDGSLTI ANALHQKGLR VVGVPKTIDN DLDKTFTTFG FDTAVGFATE CLDRLHSTAE
SHQRVMVVEV MGRYAGWIAL HSGIAGNAHV ILMPEISFDL EQVAAKIRAR DAEGRLYSIV
LVAEGAQPGD GHRELAAPAE AGHAERLGGI GERVGRALAE RTGKDTRVVV LGHLLRGGSP
TAFDRLAALR FGAAAVRALD EGQSGIMVSL GLTGVDYVAL EEVAGHMKAV PLDSDTLQTG
RDLGICFGD
|
|---|
| |