Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1457 |
Symbol | |
ID | 3962905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1566918 |
End bp | 1568861 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916275 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_522721 |
Protein GI | 89900250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTACC TCGTGCTCGC CCGCAAGTAC CGCCCCCGCA ACTTCACTGA AATGGTGGGG CAGGACCACG TGGTGCAAGC GCTCACCAAC GCGCTCACCA CGCAGCGGCT GCACCACGCT TATTTATTCA CCGGCACGCG TGGTGTTGGC AAGACCACGG TGTCGCGCAT TTTGGCCAAG TCGCTCAATT GCCAGGGGCC GGACGGGCAG GGCGGCATCA CGGCCACGCC GTGTGGCGTG TGCCAGGCGT GCATAGACAT TGATTCCGGC CGCTTTGTCG ATTACACCGA GCTCGACGCG GCCTCCAACC GGGGTGTTGA CGAAGTACAG GCGCTCCTGG AACAGGCCGT CTACAAGCCG GTGCAGGGGC GCTTCAAGGT CTTCATGATC GACGAGGTGC ACATGCTCAC CGGACATGCC TTCAACGCCA TGTTGAAGAC GCTGGAGGAG CCGCCCGAGT ACTTGAAATT TGTGCTGGCC ACCACCGACC CGCAGAAGGT GCCGGTCACG GTGCTGTCGC GCTGTCTGCA GTTCAACCTG CGCCCGATAG CGCCCGAGAC CATCCGTGAG CACCTGCAAA CGGTCTTGCA AGCCGAGAAA GTGGCGGCCG ATGTGCCGTC GCTGCGGCTG CTGGCGCGTG CGGCGCACGG CTCCATGCGC GATGCCTTGA GTCTGGCTGA TCAGGCGATT TCGTTTGGTG CCGGCCAGAT TGAAGAAGCG ACGGTGCGCC AGATGCTGGG CAGCGTGGAC CGCTCCTATG TGTTTCGGCT GCTGGAGGCG TTGGCCCAGG GAGACGGCAA AACGGTGGTC GAGACGTCTG AGGCCTTGCG TCTGAATGGC CTGAGTGCGG CCTCCACGCT GGAAGAAATG AGCATGGTGC TGCAGCGCAT GGCCGTTGTG CAAGCGGTGC CCAGCGCCGT TGAGTCGGAT GAAACCGACC CGCAAGCGCT GGACGTGGCG CGTCTGGCAG CACTCATGCC TGCCGACGAG ACGCAGTTGC TCTACAGCAT CTGCCTGCAT GGGCGCGCGG AGTTGGGCCT GGCGCCGGAC GAGTACGCCG CATTGACCAT GGTGTTGCTG CGACTGCTGG CGTTCAAACC CCGCGCTGGC AATCTGCCTG TGGCTGAAAA AAAAACTTTA ACTGACGCGC CGCGGGGGCT TGCTGCAGCC GCACCCCGTC CAGTTCCAGC GCTGGGGCAG GTGGTGACCG AGGTGCCTGT TTTTGAGAAA AAAGAGACTC CAGCCCCCGT CGAATATTCG CAGTCAGCTA TAAAAATAGT AGCAAACGCA GAAGCGCAGA TCAATACAGA AGAAAAGGTT GAATCAGAGG TTCACGCAGA GGCAGAGGCA TTGCAGCCAC CCCCAACGGG TCAGCATCTG CATGTGGTCC AGCTACCGGT GGCTGCGGGA CAGTCCCTCA CTTCTGAGCA AAATAGACCT CTAGCCCCCG TGGAATATGC GCAAGATGCT GCAAAAATAG TAGCTATTCC GGTGCGCGTG CAGGCCGATT CCCGCGCCGA GGCGGTGGCT GGACAGTCGG CTGCGTCTTT GTTGCTTCCC ACCGAAGAGG GCGAGTTCTG GCACGGCATC GTGCGCCAAC TCATCGCCCG GGAAGCGATC AACGCCATGG TGCGCGAACT GGCCCTGCAG TCGCAACTGG TGGCGCGCGA CACCGACCAG TGGCTGTTGC GGGTCGAGCG CGAATCGCTG AACCAGTCGG GTAGCCGTGA CCGTCTGGCG ACTGCGTTGC AGGCGGCGGG TTACGCGGTG CGCTTGGTGG TGGAGATTGG GCGCGTGACC GACAGCCCGG CCCGGCGTAA CGCGGCGCTG GTGGCCGAGC GGCAGCTGGC GGCAGAAAAA ATCATTTTTG ATGATCCGTT TGTGCAGGCG ATGATGCGTG ATTTTGGCGC GAAAATCGTG CCTGGCAGCA TCACACCAGG CTGA
|
Protein sequence | MSYLVLARKY RPRNFTEMVG QDHVVQALTN ALTTQRLHHA YLFTGTRGVG KTTVSRILAK SLNCQGPDGQ GGITATPCGV CQACIDIDSG RFVDYTELDA ASNRGVDEVQ ALLEQAVYKP VQGRFKVFMI DEVHMLTGHA FNAMLKTLEE PPEYLKFVLA TTDPQKVPVT VLSRCLQFNL RPIAPETIRE HLQTVLQAEK VAADVPSLRL LARAAHGSMR DALSLADQAI SFGAGQIEEA TVRQMLGSVD RSYVFRLLEA LAQGDGKTVV ETSEALRLNG LSAASTLEEM SMVLQRMAVV QAVPSAVESD ETDPQALDVA RLAALMPADE TQLLYSICLH GRAELGLAPD EYAALTMVLL RLLAFKPRAG NLPVAEKKTL TDAPRGLAAA APRPVPALGQ VVTEVPVFEK KETPAPVEYS QSAIKIVANA EAQINTEEKV ESEVHAEAEA LQPPPTGQHL HVVQLPVAAG QSLTSEQNRP LAPVEYAQDA AKIVAIPVRV QADSRAEAVA GQSAASLLLP TEEGEFWHGI VRQLIAREAI NAMVRELALQ SQLVARDTDQ WLLRVERESL NQSGSRDRLA TALQAAGYAV RLVVEIGRVT DSPARRNAAL VAERQLAAEK IIFDDPFVQA MMRDFGAKIV PGSITPG
|
| |