Gene Rfer_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1457 
Symbol 
ID3962905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1566918 
End bp1568861 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content62% 
IMG OID637916275 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_522721 
Protein GI89900250 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTACC TCGTGCTCGC CCGCAAGTAC CGCCCCCGCA ACTTCACTGA AATGGTGGGG 
CAGGACCACG TGGTGCAAGC GCTCACCAAC GCGCTCACCA CGCAGCGGCT GCACCACGCT
TATTTATTCA CCGGCACGCG TGGTGTTGGC AAGACCACGG TGTCGCGCAT TTTGGCCAAG
TCGCTCAATT GCCAGGGGCC GGACGGGCAG GGCGGCATCA CGGCCACGCC GTGTGGCGTG
TGCCAGGCGT GCATAGACAT TGATTCCGGC CGCTTTGTCG ATTACACCGA GCTCGACGCG
GCCTCCAACC GGGGTGTTGA CGAAGTACAG GCGCTCCTGG AACAGGCCGT CTACAAGCCG
GTGCAGGGGC GCTTCAAGGT CTTCATGATC GACGAGGTGC ACATGCTCAC CGGACATGCC
TTCAACGCCA TGTTGAAGAC GCTGGAGGAG CCGCCCGAGT ACTTGAAATT TGTGCTGGCC
ACCACCGACC CGCAGAAGGT GCCGGTCACG GTGCTGTCGC GCTGTCTGCA GTTCAACCTG
CGCCCGATAG CGCCCGAGAC CATCCGTGAG CACCTGCAAA CGGTCTTGCA AGCCGAGAAA
GTGGCGGCCG ATGTGCCGTC GCTGCGGCTG CTGGCGCGTG CGGCGCACGG CTCCATGCGC
GATGCCTTGA GTCTGGCTGA TCAGGCGATT TCGTTTGGTG CCGGCCAGAT TGAAGAAGCG
ACGGTGCGCC AGATGCTGGG CAGCGTGGAC CGCTCCTATG TGTTTCGGCT GCTGGAGGCG
TTGGCCCAGG GAGACGGCAA AACGGTGGTC GAGACGTCTG AGGCCTTGCG TCTGAATGGC
CTGAGTGCGG CCTCCACGCT GGAAGAAATG AGCATGGTGC TGCAGCGCAT GGCCGTTGTG
CAAGCGGTGC CCAGCGCCGT TGAGTCGGAT GAAACCGACC CGCAAGCGCT GGACGTGGCG
CGTCTGGCAG CACTCATGCC TGCCGACGAG ACGCAGTTGC TCTACAGCAT CTGCCTGCAT
GGGCGCGCGG AGTTGGGCCT GGCGCCGGAC GAGTACGCCG CATTGACCAT GGTGTTGCTG
CGACTGCTGG CGTTCAAACC CCGCGCTGGC AATCTGCCTG TGGCTGAAAA AAAAACTTTA
ACTGACGCGC CGCGGGGGCT TGCTGCAGCC GCACCCCGTC CAGTTCCAGC GCTGGGGCAG
GTGGTGACCG AGGTGCCTGT TTTTGAGAAA AAAGAGACTC CAGCCCCCGT CGAATATTCG
CAGTCAGCTA TAAAAATAGT AGCAAACGCA GAAGCGCAGA TCAATACAGA AGAAAAGGTT
GAATCAGAGG TTCACGCAGA GGCAGAGGCA TTGCAGCCAC CCCCAACGGG TCAGCATCTG
CATGTGGTCC AGCTACCGGT GGCTGCGGGA CAGTCCCTCA CTTCTGAGCA AAATAGACCT
CTAGCCCCCG TGGAATATGC GCAAGATGCT GCAAAAATAG TAGCTATTCC GGTGCGCGTG
CAGGCCGATT CCCGCGCCGA GGCGGTGGCT GGACAGTCGG CTGCGTCTTT GTTGCTTCCC
ACCGAAGAGG GCGAGTTCTG GCACGGCATC GTGCGCCAAC TCATCGCCCG GGAAGCGATC
AACGCCATGG TGCGCGAACT GGCCCTGCAG TCGCAACTGG TGGCGCGCGA CACCGACCAG
TGGCTGTTGC GGGTCGAGCG CGAATCGCTG AACCAGTCGG GTAGCCGTGA CCGTCTGGCG
ACTGCGTTGC AGGCGGCGGG TTACGCGGTG CGCTTGGTGG TGGAGATTGG GCGCGTGACC
GACAGCCCGG CCCGGCGTAA CGCGGCGCTG GTGGCCGAGC GGCAGCTGGC GGCAGAAAAA
ATCATTTTTG ATGATCCGTT TGTGCAGGCG ATGATGCGTG ATTTTGGCGC GAAAATCGTG
CCTGGCAGCA TCACACCAGG CTGA
 
Protein sequence
MSYLVLARKY RPRNFTEMVG QDHVVQALTN ALTTQRLHHA YLFTGTRGVG KTTVSRILAK 
SLNCQGPDGQ GGITATPCGV CQACIDIDSG RFVDYTELDA ASNRGVDEVQ ALLEQAVYKP
VQGRFKVFMI DEVHMLTGHA FNAMLKTLEE PPEYLKFVLA TTDPQKVPVT VLSRCLQFNL
RPIAPETIRE HLQTVLQAEK VAADVPSLRL LARAAHGSMR DALSLADQAI SFGAGQIEEA
TVRQMLGSVD RSYVFRLLEA LAQGDGKTVV ETSEALRLNG LSAASTLEEM SMVLQRMAVV
QAVPSAVESD ETDPQALDVA RLAALMPADE TQLLYSICLH GRAELGLAPD EYAALTMVLL
RLLAFKPRAG NLPVAEKKTL TDAPRGLAAA APRPVPALGQ VVTEVPVFEK KETPAPVEYS
QSAIKIVANA EAQINTEEKV ESEVHAEAEA LQPPPTGQHL HVVQLPVAAG QSLTSEQNRP
LAPVEYAQDA AKIVAIPVRV QADSRAEAVA GQSAASLLLP TEEGEFWHGI VRQLIAREAI
NAMVRELALQ SQLVARDTDQ WLLRVERESL NQSGSRDRLA TALQAAGYAV RLVVEIGRVT
DSPARRNAAL VAERQLAAEK IIFDDPFVQA MMRDFGAKIV PGSITPG