| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1436 |
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| Symbol | |
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| ID | 3963133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1549682 |
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| End bp | 1550578 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916253 |
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| Product | DNA ligase |
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| Protein accession | YP_522700 |
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| Protein GI | 89900229 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.532256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCATC CATTCATCAG CCGACCTTTC AGCTGTTTAA CGCTGCTCTT GGGTTCGGTG
TTTTCCCCTG GGGCGTTCGC TGTGGCAGAC ACGACTGCGG TCGACACGCA GGACGTATCC
GTATCGCCCC CCGCGCTCAT GCTGGCCAAG TACTGGCAGT CAGGTGTTGA TCCGGCGGCT
TTTCTTGTCA GTGAAAAGCT CGATGGTGTA CGCGCGTTTT GGGATGGGCA CACCTTGCGT
TCTCGCAGCG GTCGGCGCAT TGCGGCACCC GACTGGTTCA CCTCCGCTTT GCCGGCCACT
GCGTTGGATG GCGAGTTGTG GTTGGGACGA GGCAGTTTTG ATCGTCTTTC TGGCATGGCT
CGGCGCAACA CGCCGGTTGA CGCCGAATGG CGCGAATTGC GCTACATGAT TTTTGACCTG
CCTGGTGCAA GCGACACTTT TGCCCTGCGC GTCCAGCGCC TGAATCAGGT GGTGGCCAAT
GCCCGCCAGC CGTGGCTGCA GGTGGTGGTT CAACAGCGCG TGCCGGATGC TGCCGCGCTG
CAGGCTTTGT TGCAGCAGAC AGTGCAAAAT GGCGGCGAAG GACTGGTCTT GCACCGCACC
AATGCCCTCT GGTCGCCCGG TCGCAGCGAT GTGCTGCTGA AACTCAAACC GATGCCCGAC
GAAGAGGCGC GCGTGGTGGC GCACCTGCCC GGCAGAGGCC GCAATCAAGG GCGCATGGGC
GCCTTGCTGC TGGAGATGTC CAACGGCCAG CGGTTTGCCT TGGGCACTGG CTTTGCAGAC
GCCCAGCGCG CCGACCCACC GCCGGTGGGA TCGTTGGTGA CCTACCGCTA CCGCGATCGC
ACCCCCAAGG GCTTGCCGCG TTTTGCCTCC TTCTTAAGGG TAAGGGCGCC GGAATAG
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| Protein sequence | MAHPFISRPF SCLTLLLGSV FSPGAFAVAD TTAVDTQDVS VSPPALMLAK YWQSGVDPAA
FLVSEKLDGV RAFWDGHTLR SRSGRRIAAP DWFTSALPAT ALDGELWLGR GSFDRLSGMA
RRNTPVDAEW RELRYMIFDL PGASDTFALR VQRLNQVVAN ARQPWLQVVV QQRVPDAAAL
QALLQQTVQN GGEGLVLHRT NALWSPGRSD VLLKLKPMPD EEARVVAHLP GRGRNQGRMG
ALLLEMSNGQ RFALGTGFAD AQRADPPPVG SLVTYRYRDR TPKGLPRFAS FLRVRAPE
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