Gene Rfer_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1353 
Symbol 
ID3960581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1456187 
End bp1457455 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID637916169 
Productaspartate kinase 
Protein accessionYP_522618 
Protein GI89900147 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0422902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGA TCGTTCACAA ATATGGCGGC ACGTCGATGG GCTCAACCGA GCGCATCCGC 
AACGTCGCCA AACGCGTCGC CAAATGGGCG CGCGCTGGCC ATCAGATGGT GGTCGTACCA
AGCGCCATGA GCGGCGAGAC CAACCGTTTG CTGGCGCTGG CGAAAGAACT GGCGCCGGCG
AAAGCAACTG AGTCCTACAG CCGCGAGCTC GACATGCTGG CCGCCACTGG CGAGCAGGCC
TCCAGCGCCT TGCTGGCCAT TGCGCTGCAA GCCGAAGGGC TGGAGTCAGT GAGCTACGCT
GGCTGGCAAG TGCCCATTCG CACCAACAGT GCGTACACCA AAGCACGTAT CGAGTCGATT
GAAGACACCA AGGTGCGCGC TGATCTCGAC GCTGGCCGCG TGGTCATCGT CACCGGCTTT
CAAGGTCTGG ACGAACTGGG CAACATCACG ACACTGGGGC GTGGTGGCTC GGATACTTCT
GCCGTGGCCG TGGCAGCCGC CATGAAGGCC GATGAATGCC TGATCTACAC CGACGTCGAT
GGTGTCTATA CCACCGACCC ACGTGTGGTT CCCGAGGCAC GCCGCCTGCA GACCGTGAGT
TTTGAGGAGA TGCTGGAAAT GGCCTCCATG GGCTCCAAAG TGCTGCAGAT CCGGTCGGTC
GAATTTGCCG GCAAATACAA AGTCAAGCTG CGTGTTTTGA GCAGCTTTAC GCCGTGGGAT
ATTGATATCA ACGAGGAAGC CGCCTCCGGC ACCTTGATCA CTTTTGAGGA AGACGAACAC
ATGGAACAAG CCATTGTTTC CGGCATTGCG TTCAGCCGCG ATGAAGCCAA AATCTCCGTC
CTGGGCGTGC CCGACAAGCC TGGAATTGCC TATCAGATTC TGGGCGCCGT GGCCGATGCC
AATATTGATG TCGATGTGAT CATTCAGAAC ATCAGCAAAG ATGGCAAGAC CGATTTCAGC
TTCACGGTTA ACCGGGGCGA ATATGCCAAG ACCGTCGATT TGCTGAAAGA AAAAGTGCTG
CCCAAGCTGG GGGCCCAAGA GGTGGTGGGC GACACCAAAA TCTGCAAAGT GTCGATCGTC
GGGATTGGCA TGCGCAGTCA CGTGGGTGTG GCCAGCAAAA TGTTTCGCGT CCTGAGTGAA
GAAGGCATCA ACATTCAGAT GATTTCAACC TCCGAGATCA AGACCTCCGT GGTGATTGAC
GAGAAGTACA TGGAACTGGC GGTGCGTGCC TTGCACAAGG CATTTGAGCT TGAACAGGCG
CCTGCTTAA
 
Protein sequence
MALIVHKYGG TSMGSTERIR NVAKRVAKWA RAGHQMVVVP SAMSGETNRL LALAKELAPA 
KATESYSREL DMLAATGEQA SSALLAIALQ AEGLESVSYA GWQVPIRTNS AYTKARIESI
EDTKVRADLD AGRVVIVTGF QGLDELGNIT TLGRGGSDTS AVAVAAAMKA DECLIYTDVD
GVYTTDPRVV PEARRLQTVS FEEMLEMASM GSKVLQIRSV EFAGKYKVKL RVLSSFTPWD
IDINEEAASG TLITFEEDEH MEQAIVSGIA FSRDEAKISV LGVPDKPGIA YQILGAVADA
NIDVDVIIQN ISKDGKTDFS FTVNRGEYAK TVDLLKEKVL PKLGAQEVVG DTKICKVSIV
GIGMRSHVGV ASKMFRVLSE EGINIQMIST SEIKTSVVID EKYMELAVRA LHKAFELEQA
PA