Gene Rfer_1336 details

Gene Information

• Locus tag: Rfer_1336
• Symbol: thrS
• ID: 3961367
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 1439257
• End bp: 1441266
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637916151
• Product: threonyl-tRNA synthetase
• Protein accession: YP_522601
• Protein GI: 89900130
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTGCGCTG GCAGTTACAA AAATCATAGT AGAGCGCGGC CGGTTCCGCG CTTTTTTTTG 
CCCTACATCT TTCTGGTTTT CATCATGATT CAAATCACAC TTCCTGACGG TTCCCAACGC 
GACTATCCCG CTCCGGTGAC AGTGGCCGAG GTGGCCGCCT CCATTGGGTC TGGGTTGGCC 
AAGGCAGCCT TGGCGGGTAA AGTTGACGGC AAGGTAGTGG ACACCAGTTA TCTGATCGAA 
GCGAACAGCG CGGTGGCCAT CGTCACGGCC AAAGACGCCG AGGGGCTGGA GGTCATCCGC 
CATTCGACCG CGCATTTGTT GGCTTACGCG GTCAAAGAAT TGTTCCCGGA TGCGCAAGTC 
ACGATCGGCC CGGTGATTGA AAACGGCTTT TTCTACGATT TTTCCTACAA GCGCCCGTTT 
ACGCCAGAGG ACTTGCTCGC GATCGAGCAG AAGATGGCTG CGCTGGCCGC CAAAGACGAG 
CCCGTCACCC GCCGCGTGCT GCCGCGCGAC GAGGCAGTGG CCTACTTCAA AGGCTTGGGT 
GAGAACTACA AGGCGGAAAT CATCGCCAGC ATTCCGGCGG GCGAAGACGT GTCGCTTTAC 
CGCGAAGGCA AGTTCGAAGA TTTGTGCCGT GGCCCGCATG TGCCCAGCAC TGGCAAACTG 
AAGTTCTTCA AACTGATGAA GCTGGCCGGC GCCTACTGGC GCGGGGACCA TCGCAACGAA 
ATGCTGCAGC GCATCTACGG CACGGCGTGG GCCACGAAGG ATGAATTGCA GCAGCACTTG 
ACGATGCTCG AAGAAGCCGA GAAGCGCGAT CACCGCAAAC TCGGGCGCGA ACTTGATCTG 
TTTCACATTG ATGACCATGC GCCGGGTCTG GTGTTCTGGC ACCCCAAGGG CTGGACCTTG 
TGGCAGGGCG TGGAGCAATA CATGCGCCAG GTGTACCGCG ACAACGGTTA CCAGGAGGTC 
AAAGGGCCAC AGATCCTCGA CAAGTCTTTG TGGGAGAAGA CCGGCCACTG GGACAAATAC 
CGGGAGAACA TGTTCACGAC CGAGTCGGAG AAGCGCGAAT ACGCCCTCAA GCCGATGAAC 
TGTCCCGGCC ACATCCTGAT CTTCAAACAG GGCATCAAGA GCTATCGCGA TCTGCCGCTG 
CGCTATGGCG AGTTCGGCCA GTGCCATCGC AATGAACCTT CGGGCGGCTT GCACGGCATC 
ATGCGGGTGC GCGGCTTCAC GCAGGATGAC GGTCACATCT TTTGCACCGA AGACCAGATC 
TTGCAGGAGT GTGTCGATTA CACGGCGCTG CTGCAAAAAG TCTATGCCGA TTTTGGTTTC 
GAGAACATCA TCTACAAGGT TGCCACTCGT CCGGAGCAAC GCATTGGCTC CGATGACGTA 
TGGGACAAAG CCGAAGCTGC CTTGATTGAA AGCCTGCGTG CGTCTGGTCG CGAGTTTGAG 
ATTTCTCCGG GGGAGGGCGC GTTTTATGGG CCCAAGATTG AATACACGCT CAAGGATGCG 
ATTGGACGCC ATTGGCAATG TGGCACTATT CAAGTGGACT TTTCAATGCC TGAGCGGCTG 
GATGCCGAAT ATGTAGGCGA GGACGGTGCC CGTCACCGGC CGGTGATGCT ACATCGTGCC 
ATCGTCGGTA GTCTGGAACG TTTCATCGGA ATTTTGATCG AGGAAAGTGC CGGCGCTTTG 
CCAACCTGGC TGGCTCCGGT GCAGGTTGCC GTGCTCAATA TCACCGACGC GCAGGCTGAA 
TATTGTCGCG AAATTGTTGA AAAATTAAAA AATGCATTGC CAGATCAAAG GCTTAGGGCG 
GTCGCTGATC TGCGGAATGA AAAAATTACG TTTAAAATAC GCGAGCATTC AATGCAAAAG 
CTGCCCTATA TCTTGGTCGT TGGTGACAAA GAGAAAGCAG CAGGTACCGT TGCAGTGCGC 
GCCCGAGGTG GTTTAGACCT CGGTGTGATG TCCCTCGATG CATTCGTGCA AAAAATATCC 
AGTGACATCA CTCACAAGTC TGTTGGTTGA 

 

Protein sequence

MCAGSYKNHS RARPVPRFFL PYIFLVFIMI QITLPDGSQR DYPAPVTVAE VAASIGSGLA 
KAALAGKVDG KVVDTSYLIE ANSAVAIVTA KDAEGLEVIR HSTAHLLAYA VKELFPDAQV 
TIGPVIENGF FYDFSYKRPF TPEDLLAIEQ KMAALAAKDE PVTRRVLPRD EAVAYFKGLG 
ENYKAEIIAS IPAGEDVSLY REGKFEDLCR GPHVPSTGKL KFFKLMKLAG AYWRGDHRNE 
MLQRIYGTAW ATKDELQQHL TMLEEAEKRD HRKLGRELDL FHIDDHAPGL VFWHPKGWTL 
WQGVEQYMRQ VYRDNGYQEV KGPQILDKSL WEKTGHWDKY RENMFTTESE KREYALKPMN 
CPGHILIFKQ GIKSYRDLPL RYGEFGQCHR NEPSGGLHGI MRVRGFTQDD GHIFCTEDQI 
LQECVDYTAL LQKVYADFGF ENIIYKVATR PEQRIGSDDV WDKAEAALIE SLRASGREFE 
ISPGEGAFYG PKIEYTLKDA IGRHWQCGTI QVDFSMPERL DAEYVGEDGA RHRPVMLHRA 
IVGSLERFIG ILIEESAGAL PTWLAPVQVA VLNITDAQAE YCREIVEKLK NALPDQRLRA 
VADLRNEKIT FKIREHSMQK LPYILVVGDK EKAAGTVAVR ARGGLDLGVM SLDAFVQKIS 
SDITHKSVG