| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1332 |
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| Symbol | |
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| ID | 3961363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1433609 |
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| End bp | 1434865 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637916147 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_522597 |
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| Protein GI | 89900126 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.837606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA CCCCCGCACT TATCCCCCAA TCCGACACGA CTCCGCGCTG TTGGGCCTTG
ATTCCCTGCG CGGGCACCGG CTCGCGGGCC GGGGCGACAG GCCCCAAGCA GTACCAGCTG
CTGGCCGGCA AGCCGATGGT GCTGCACACC CTGGCGGCTT TTGCGGCGGT GCCGCGTATT
GCCCGCACAC TGGTGGTGGT GGCGCCAGAC GATGCATTTT TTGCTTCGCA AACCTTGACT
GATGCTCGCT TTTTAGTAGC TGCTTGTGGA GGTTCCACGA GGGCTGCAAG CGTATTGAAT
GGCTTGAATT TTCTGCTGGG GCAAGGTGCT GCCCGGCACG ACTGGGTGCT GGTGCACGAC
GCCGCACGCT GTCTGATTCG TCCGGACCAG ATCGATCAGT TGATCGATGC CTGTTGGCAA
GATGACGTGG GCGGCCTGCT GGCACTGCCT TTGCCTGACA CCCTCAAACG TGAATCCCTT
GGCCGGGTGG CCGCCACCCT GGAGCGTGCC GACAAGTGGC TGGCGCAAAC CCCCCAGATG
TTTCGCCTGG GCAGTCTGCT GGACGCGTTG CAGGTGGCAG GCACCACCGT CACCGACGAG
TCCAGCGCCA TGGAAGCCAT GGGCCTGAGC CCGAAGCTGG TGCCCGGTAG CGCCCAGAAT
TTCAAGGTGA CTTACCCGCA AGACTTCTGC CTGGCCGAAG CGGTGTTGAT GACGCGCTCA
TCGGGCGATT CTGCGCCGCA ACAGTCGGCA AGCGAATTTA AAAGGGCCAG TGACATGAAT
TTCAGAATCG GAGAAGGCTG GGACATCCAT GCCCTGGTTG CGGGGCGCAA GCTCCTGTTG
GGGGGCGTCG AGATTCCCTA TCACCTCGGG CTGCTCGGCC ACTCGGACGC GGACGTGCTG
TTGCACGCCA TCACCGATGC CCTGCTGGGC GCCGCCGCGC TGGGGGACAT CGGCACGCAT
TTTCCGGACA CCGATGCGCG CTTCAAGGGC GCCGATTCGT TGGTTTTGCT GACGGAGGCC
GCGCGGCGCG TGCGCGCCAA GGGTTTTGAG ATCGGCAATG TCGACAGCAC GGTGATCGCG
CAGGCGCCCA AGTTGATGCC CTATATGGCC GCCATGCGAG CGCAAATTGC GCTGGCGCTG
GCGCTTGAGG TCGATCAAGT CAATGTCAAA GCCAAGACGG CAGAAAAAAT GGGCCCGGTG
GGGCTGGGTC AGGCCATGGA AGCGCGCGCC ACGGTGCTGT TGCGGAAATT TATATAA
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| Protein sequence | MADTPALIPQ SDTTPRCWAL IPCAGTGSRA GATGPKQYQL LAGKPMVLHT LAAFAAVPRI
ARTLVVVAPD DAFFASQTLT DARFLVAACG GSTRAASVLN GLNFLLGQGA ARHDWVLVHD
AARCLIRPDQ IDQLIDACWQ DDVGGLLALP LPDTLKRESL GRVAATLERA DKWLAQTPQM
FRLGSLLDAL QVAGTTVTDE SSAMEAMGLS PKLVPGSAQN FKVTYPQDFC LAEAVLMTRS
SGDSAPQQSA SEFKRASDMN FRIGEGWDIH ALVAGRKLLL GGVEIPYHLG LLGHSDADVL
LHAITDALLG AAALGDIGTH FPDTDARFKG ADSLVLLTEA ARRVRAKGFE IGNVDSTVIA
QAPKLMPYMA AMRAQIALAL ALEVDQVNVK AKTAEKMGPV GLGQAMEARA TVLLRKFI
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