Gene Rfer_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1314 
Symbol 
ID3961538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1405656 
End bp1408232 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content64% 
IMG OID637916129 
Productcyanophycin synthetase 
Protein accessionYP_522579 
Protein GI89900108 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR02068] cyanophycin synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.098804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCT CACGCGTTCG CGCCCTGCGC GGCCCCAATC TCTGGAGCAG TCACACCGCC 
ATCGAGGCGG TCGTGACCTG CACACCGGCC GAGTGCGCCA TCAACACGCA CGACGGCTTT
GAGAGCCGTC TTCGGGCGCG CTTCCCAAAA CTCGGAACAC TGCTGCCGAC CGGGCACGAC
GCCACGGTAC CCATGGCCCA TGTGCTCGAA ATGGCCGCGC TGGATCTGCA GGCCCTGGCT
GGCTGCCCGG TTACCTTCGC ACGCACAACG GCCACCACGG AACCCGGCGT CTACCAGATT
GTGGTGGAGT ATTCAGAAGA GGCGGTGGGC CGCCTGGCCC TGGAGCTGGC CCAATCCCTG
TGTCTGGCGG CGCAAAACGA CACCCCCTTC GATCTGCCGC AAGCGCTGCA GCGCTTGCGC
GAACTCGACG AAGATGTACG CCTGGGGCCG AGCACGGGCG CCATCGTGCA GGCGGCGCTT
GCGCGCAACA TTCCCTTTCG CCGCATGACG CAAGGCAGCA TGATCATGTT TGGCTGGGGC
AGCAAGCAGC GCCGCATCCA GGCCGCCGAA ATGGACATCA CCGGTGCCAT CGCGGAAGCA
ATCGCCCAGG ACAAACAGCT GACCAAAAAG CTGCTGGCTG CGGCGGGCGT GCCGGTTCCG
CTCGGCCGTG AGGTCGATAC CCCTGAAGAT GCCTGGATGG CCGCCTGCGA AGTCGGTCTG
CCGGTCGTGG TCAAGCCCAA GAGTGGCAAC CAGGGCAAGG GCGTGACGGT CAACATCACG
TCGCGTGAAC AGCTGACAGC GGCTTACGCG GCAGCCGCCG AGTTCGGCGA TGACATCCTG
GTCGAACGCT ACATTCCCGG TAACGACTTT CGCCTGCTGG TGGTTGGCAA CAAGCTGGTG
GCAGCGGCCT ATCGTGAACC GCCCAACGTG GTGGGTGATG GTCAGCACAC CATCCGTGAA
ATGGTGGAAC AGGTCAACAA AGACCCGCGC CGCGGCTCCG GCCATGCGAC CTCGCTGACC
AAAATCCGAT TTGACGATAT TGCCCTGGCG TGCCTGGCAG GCCAGGGCCT TGATGCCGAC
TCGGTTCCCC CCAAGGGCCA ACGCGTCACC CTGCGCCACA ACGCCAATCT ATCCACCGGC
GGCTCCGCCA CCGATGTCAC CGACAGCGTG CACCCGGAAG TGGCAGCCCG TGCCGTGGCT
GCCGCACGAA TGGTGGGACT CGATATTTGC GGCGTGGACG TGGTCTGCAA CAGCATCCTG
CATACGCTCG AAGAACAGGG CGGCGGCGTG GTCGAGGTCA ATGCCGCGCC CGGTCTGCGC
ATGCACCTGT CGCCGTCCTA CGGCAAGGGG CGCCCGGTGG GTGAGGCCAT CATCACCAGC
ATGTTCGACC AGCATGAGAA TGGCCGTATT CCGCTGGTGG CCGTCACCGG CACCAACGGC
AAGACCACCA CCGTGCGCCT GATCTCGCAC CTGCTGGCCC AAAACGGCCT GCGCGTCGGC
ATGACCAATA CGGATGGTGT CTACATCGCG GGTCAGCGCA TCGACACCGG CGACTGCAGC
GGCCCCAAAA GTGCGCGCAA TGTGTTGCAG CACCCCGACG TGGATGCCGC CGTGCTGGAA
ACCGCCCGCG GCGGCATGCT GCGCGAAGGG CTGGCCTTTG ACCGTTGTGA TGTGGCCGTG
GTGACCAATG TCGGAAGCGG TGACCACCTG GGCCTGAACT ACATCACGAC GGTTGAAGAT
CTGGCCGTGC TCAAACGCGT GATCGTACAA AACATCGCCA GTGACGGTGT GGCGGTGCTC
AATGCGGCGG ACCCCATTGT GGTCTCCATG GCCAGGCACT GCAGCGCTTC GATCATCTTT
TTTGCCATGG ACAGGCATCA TCCGGTCATG GCCACGCACT TGGCGCAGGG GCGACGCGCC
GTCTACGTGG AAGGCGACCA TCTGGTGGCT GCCGAGGGCA AGGTGCAGCA CCAGATGGCG
CTGTCGGACA TCCCCATTTC CCGTCGGGGC ACCATCGGGT TTCAGATCGA AAACGTCATG
GCTTCGGCGG CTGCCGTATG GGCCCTTGGG GTCGGGTGGG AGACGATCAA GCTCGGACTG
GCCAGTTTTA TCAACAACAA CGACAACGCA CTGGGCCGCT TCAACCTGTT CAGCTACCGG
GGCGCCACCG TCATTGCCGA CTACGGCCAC AACCCGGATG CGATTGCGGC GCTGGTTCAG
GCGGTGGCAA GCATGCCCTC CAAGCGTCGC ACCGTCGTGA TCAGCGGCGC CGGCGACCGG
CGCGATGAAG ACATTCGCCA ACAGACTGAA ATTCTGGGCA ACGCGTTTGA CAACGTGGTG
CTGTACCAGG ACCAGTGTCA GCGCGGCCGC GCCGACGGCG AGGTGCTGGC GCTGCTGCGC
GAGGGTCTGG CCCATGCGAC ACGCACCGAA TCCATCGCCG AGATTCAGGG TGAGTTTCTC
GCCATTGACA CCGCGATGGA CACCCTGGGC GAGGGCGATC TGTGCCTGAT TCTGGTTGAT
CAGGTCGAGC AAGCGCTGGC GCATATTGCA ACGCGAATTA AAAAAGACGC GGGCTGA
 
Protein sequence
MDISRVRALR GPNLWSSHTA IEAVVTCTPA ECAINTHDGF ESRLRARFPK LGTLLPTGHD 
ATVPMAHVLE MAALDLQALA GCPVTFARTT ATTEPGVYQI VVEYSEEAVG RLALELAQSL
CLAAQNDTPF DLPQALQRLR ELDEDVRLGP STGAIVQAAL ARNIPFRRMT QGSMIMFGWG
SKQRRIQAAE MDITGAIAEA IAQDKQLTKK LLAAAGVPVP LGREVDTPED AWMAACEVGL
PVVVKPKSGN QGKGVTVNIT SREQLTAAYA AAAEFGDDIL VERYIPGNDF RLLVVGNKLV
AAAYREPPNV VGDGQHTIRE MVEQVNKDPR RGSGHATSLT KIRFDDIALA CLAGQGLDAD
SVPPKGQRVT LRHNANLSTG GSATDVTDSV HPEVAARAVA AARMVGLDIC GVDVVCNSIL
HTLEEQGGGV VEVNAAPGLR MHLSPSYGKG RPVGEAIITS MFDQHENGRI PLVAVTGTNG
KTTTVRLISH LLAQNGLRVG MTNTDGVYIA GQRIDTGDCS GPKSARNVLQ HPDVDAAVLE
TARGGMLREG LAFDRCDVAV VTNVGSGDHL GLNYITTVED LAVLKRVIVQ NIASDGVAVL
NAADPIVVSM ARHCSASIIF FAMDRHHPVM ATHLAQGRRA VYVEGDHLVA AEGKVQHQMA
LSDIPISRRG TIGFQIENVM ASAAAVWALG VGWETIKLGL ASFINNNDNA LGRFNLFSYR
GATVIADYGH NPDAIAALVQ AVASMPSKRR TVVISGAGDR RDEDIRQQTE ILGNAFDNVV
LYQDQCQRGR ADGEVLALLR EGLAHATRTE SIAEIQGEFL AIDTAMDTLG EGDLCLILVD
QVEQALAHIA TRIKKDAG