Gene Rfer_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1307 
Symbol 
ID3961531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1399900 
End bp1400652 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID637916122 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_522572 
Protein GI89900101 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACG AGCAACTGCT GCGCTACTCG CGCCATATCC TGCTGAACGA AATCGGGATC 
GAAGGCCAGG CGCAGATTTT GTCCAGTCAT GCCCTGATCG TGGGTGCGGG TGGTTTGGGC
TCACCAGTTG CCCTCTACCT GGGGTCGGCT GGCGTCGGGC ACATCACGGT GGTTGACCAT
GACCGCGTGG ACATGACCAA TCTGCAGCGG CAGATCGCGC ATACCATGGA GCGTGTCGGC
CAGCCCAAGG TGCTGTCAAT TCAGACTGCC ATTGCCGCCA TCAACCCAGA CGTGCAAGTC
ACGCCCATCA TGCTACGCGC CGATGCCGCG CTGCTGGACA CCCTGGTGGC GCAGGCCGAT
GTGGTGCTGG ACTGCTCTGA CAACTTTGCC ACGCGCCACG CCATCAATAC GGCTTGTGTG
AAACACCGCA AACCGCTGGT ATCGGGGGCG GCCATCCGCT TTGATGGCCA GGTTTGTGTC
TATGACCCGC GCGACGCCAA CTCGCCCTGT TACGCCTGTG TTTTCCCCCC CGATAACACC
TTTGAAGAAA CACGCTGCGC CACGATGGGT GTTTTTGCAC CGCTGGTGGG CATCATCGGC
TCCCTGCAAG CGGCTGAAGC GCTCAAGCTG CTCAGCGCTG TCGGTAACCC CCTCACCGGG
CGCCTGCTGA TGCTCGATGG CCGCGCGATG GAGTTCACTG AAGTGCGCAT CGCACGCCAG
GCCGGCTGCC CCATCTGCGG CGCGGCGCAC TGA
 
Protein sequence
MTDEQLLRYS RHILLNEIGI EGQAQILSSH ALIVGAGGLG SPVALYLGSA GVGHITVVDH 
DRVDMTNLQR QIAHTMERVG QPKVLSIQTA IAAINPDVQV TPIMLRADAA LLDTLVAQAD
VVLDCSDNFA TRHAINTACV KHRKPLVSGA AIRFDGQVCV YDPRDANSPC YACVFPPDNT
FEETRCATMG VFAPLVGIIG SLQAAEALKL LSAVGNPLTG RLLMLDGRAM EFTEVRIARQ
AGCPICGAAH