| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1305 |
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| Symbol | |
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| ID | 3961529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1398417 |
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| End bp | 1399187 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637916120 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_522570 |
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| Protein GI | 89900099 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATC TGCATGATTT GCGTCTGGAT GATGCACGCG CGTTGCTGGC GCATGATGCG
TATGGCAGTT TGCCCGAAGC GGATGAATCC CGCACCCAGT ACCTGCAGAG AGTTATCGAC
CAGCTGTGCG AACTCTCCCT CAAAGACCCG CTGACGGGTT TGGCCAACCG ACGTCATTTC
CGCCATGTAC TGGGGCGCGA AATTGATGCA GTGGCCCGTT CAGGTGAGTC TGCGTTGCTG
TTGATGATGG ATATTGATCA TTTCAAGAAG GTCAACGACA CCTACGGCCA TTTGGCGGGA
GACCGGGTGC TGCAGGCCGT TGCCAAAGCC CTGGCGTCCT GTTTGCGCCC GATGGACACC
GTGGCGCGCT ACGGCGGCGA GGAATTCACT GCAATCCTGC CCAACTGTCC ACCCTCGTTT
GGGAAAATCG TGGCGGAACG AATCCGCGCA ACCGTCGGTT CGCTCCAGGT CTTAGTGGCG
CCGCTGGTCA GTCTGCAGGT GACGATCAGT ATTGGGGGCG CCTTTGCGCC CGAATGGGTT
CGTTCCACCA CTGCGTTATG GATCGACCGG GCCGACACCC AACTCTATCG GGCCAAGTCC
GAGGGGCGTA ATCGCGTTTA CATTGATCAG CAGCCGGAGA TCGCCGTGAG TGCAGAAGAA
AGAAAAATGT TGTTTGGCCA CCTCTCAATA GGGGACCCGG CCTGGCTGGA GAGTGTTTCG
ACTGACGCGG CGGTTGGTGC AGCAGACGGC GCCATGAAGA GGGTGAACTG A
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| Protein sequence | MIDLHDLRLD DARALLAHDA YGSLPEADES RTQYLQRVID QLCELSLKDP LTGLANRRHF
RHVLGREIDA VARSGESALL LMMDIDHFKK VNDTYGHLAG DRVLQAVAKA LASCLRPMDT
VARYGGEEFT AILPNCPPSF GKIVAERIRA TVGSLQVLVA PLVSLQVTIS IGGAFAPEWV
RSTTALWIDR ADTQLYRAKS EGRNRVYIDQ QPEIAVSAEE RKMLFGHLSI GDPAWLESVS
TDAAVGAADG AMKRVN
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