Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1283 |
Symbol | |
ID | 3962156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1375952 |
End bp | 1376737 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637916098 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_522548 |
Protein GI | 89900077 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACAC AAGACACACG CCCCCCCTGG CCCTACCCGC GCTGGATCGC GCACCGGGGC GCCGGCAAAC TGGCGCCCGA AAACACGCTG GCCGCGTTTC GTACCGGGGC CAGCCACGGT TACCGCATGT TTGAGTGCGA CGTCAAGCTG AGTCTCGATG GCGTGCCGTT CCTGCTGCAC GACGACACCT TGGTGCGCAC CACCAGTGCG CGTGAGCAGT TGGGAGCAGG ACTTGGCGCC GTCGGCGGCG ATCACCCCTG GAGCACCTTG GCTCAGCTGG ACGCAGGCAG CTGGCATTCG CGTGCTTTTG CCGGCGAGCC GCTCGCCAGT TTTGAGAATA TTGCCCGTTT TTGCCTGGCC AACGGCTATT TTCTGAACAT CGAAATCAAG CCCACGCCGG GACTCGAACA CCAGACCGGC GCAGCCGTGG CAGACCATGC CGCCCGTCTC TGGGCTCACG CCACCGTGCC ACCGCTGCTG AGCTCTTTCG CCCCGCCCGC ACTGGCAGCG GCCCGCCACG CCCAGCCGCA GCTGCCGCGC GCGCTGCTGC TCGACGCGCT GTGGAGCGGC TGGCTGGAGA CCGCCTTGTC GCTGGACTGC GTGGCCATCG TCTGCGACCA GGTGCTGTGG GACACCTCCA CCGTGGCTCA AGCCCGCAGC GCAGGACTGC GCACCCTGAG TTACACCGTG AACGACCCCT CACAGGCGCA GCGCCTGATC GACTTGGGGA CTGACGGCCT GATCACCGAC CGGGTCGACT TGTTCGCCCC GGCGCGCCAG CCCTGA
|
Protein sequence | MTTQDTRPPW PYPRWIAHRG AGKLAPENTL AAFRTGASHG YRMFECDVKL SLDGVPFLLH DDTLVRTTSA REQLGAGLGA VGGDHPWSTL AQLDAGSWHS RAFAGEPLAS FENIARFCLA NGYFLNIEIK PTPGLEHQTG AAVADHAARL WAHATVPPLL SSFAPPALAA ARHAQPQLPR ALLLDALWSG WLETALSLDC VAIVCDQVLW DTSTVAQARS AGLRTLSYTV NDPSQAQRLI DLGTDGLITD RVDLFAPARQ P
|
| |