Gene Rfer_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1283 
Symbol 
ID3962156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1375952 
End bp1376737 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID637916098 
Productglycerophosphodiester phosphodiesterase 
Protein accessionYP_522548 
Protein GI89900077 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC AAGACACACG CCCCCCCTGG CCCTACCCGC GCTGGATCGC GCACCGGGGC 
GCCGGCAAAC TGGCGCCCGA AAACACGCTG GCCGCGTTTC GTACCGGGGC CAGCCACGGT
TACCGCATGT TTGAGTGCGA CGTCAAGCTG AGTCTCGATG GCGTGCCGTT CCTGCTGCAC
GACGACACCT TGGTGCGCAC CACCAGTGCG CGTGAGCAGT TGGGAGCAGG ACTTGGCGCC
GTCGGCGGCG ATCACCCCTG GAGCACCTTG GCTCAGCTGG ACGCAGGCAG CTGGCATTCG
CGTGCTTTTG CCGGCGAGCC GCTCGCCAGT TTTGAGAATA TTGCCCGTTT TTGCCTGGCC
AACGGCTATT TTCTGAACAT CGAAATCAAG CCCACGCCGG GACTCGAACA CCAGACCGGC
GCAGCCGTGG CAGACCATGC CGCCCGTCTC TGGGCTCACG CCACCGTGCC ACCGCTGCTG
AGCTCTTTCG CCCCGCCCGC ACTGGCAGCG GCCCGCCACG CCCAGCCGCA GCTGCCGCGC
GCGCTGCTGC TCGACGCGCT GTGGAGCGGC TGGCTGGAGA CCGCCTTGTC GCTGGACTGC
GTGGCCATCG TCTGCGACCA GGTGCTGTGG GACACCTCCA CCGTGGCTCA AGCCCGCAGC
GCAGGACTGC GCACCCTGAG TTACACCGTG AACGACCCCT CACAGGCGCA GCGCCTGATC
GACTTGGGGA CTGACGGCCT GATCACCGAC CGGGTCGACT TGTTCGCCCC GGCGCGCCAG
CCCTGA
 
Protein sequence
MTTQDTRPPW PYPRWIAHRG AGKLAPENTL AAFRTGASHG YRMFECDVKL SLDGVPFLLH 
DDTLVRTTSA REQLGAGLGA VGGDHPWSTL AQLDAGSWHS RAFAGEPLAS FENIARFCLA
NGYFLNIEIK PTPGLEHQTG AAVADHAARL WAHATVPPLL SSFAPPALAA ARHAQPQLPR
ALLLDALWSG WLETALSLDC VAIVCDQVLW DTSTVAQARS AGLRTLSYTV NDPSQAQRLI
DLGTDGLITD RVDLFAPARQ P