| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1269 |
|---|
| Symbol | rpmA |
|---|
| ID | 3960627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 1362674 |
|---|
| End bp | 1362931 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637916084 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_522534 |
|---|
| Protein GI | 89900063 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000774064 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGGCGG CGGCTCAACG CACAATGGGC GCGATTCCAA GCCCAAGATG
CTCGGTGTGA AGAAGTTCGG TGGCGAATTG ATCAGCGCAG GCGCGATCAT CGTGCGCCAA
CGTGGCACCA AGTTCCACCC CGGCGTCAAT GTCGGTATCG GCAAGGATCA CACGCTGTTT
GCGCTGGTAG ACGGCCATGT GGCATTTACC ACCAAAGGCG CCATGAACAA GCCGACGGTG
AACGTTGCAA CGGCTTAA
|
|---|
| Protein sequence | MAHKKGGGST HNGRDSKPKM LGVKKFGGEL ISAGAIIVRQ RGTKFHPGVN VGIGKDHTLF
ALVDGHVAFT TKGAMNKPTV NVATA
|
|---|
| |