| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1267 |
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| Symbol | |
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| ID | 3960625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1361219 |
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| End bp | 1362202 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916082 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_522532 |
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| Protein GI | 89900061 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000414362 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGTTA ATCCATCCAG CCCCAAGCCT TCCTTGTCAG TCATTGCGCA AGACATGCGT
GAAGTCGATC AAGTCATTGC GCATCGACTT GACTCCGGGG TGCCGCTGGT GGGCCAAGTC
GCGCGCTACA TCATTGCAGC CGGCGGCAAG CGCCTGCGCC CCGCCCTGCT GCTGCTGATT
TGCGGCGCGC TCGGCTTCAA AGGGGCTCAA CGCTTCAACC TGGCTGCCGT GGTTGAGTTC
ATCCACACGT CCACGTTGCT GCACGACGAC GTGGTGGACG ATTCGTCCCT GCGGCGCGGC
AACCCGACGG CCAACGAAAC CTTTGGCAAC CCGGCCAGTG TGCTGGTGGG CGACTTTTTG
TATTCACGCT GCTTTCAGAT GATGGTAGAC GCGCAAAACA TGCGCATCAT GCAAGTCCTG
GCCGACGCCA CCAACGTCAT CGCCGAGGGC GAAGTGCAGC AGTTGATGAA CATGCACAAC
GCCGAGCTCG ATGAAGCCGG CTACCTGCAA GTAATCCGCT CCAAAACCGC CAAACTGTTC
GAGGCCAGCG CCCGAGTAGG CGCCATCCTG GCCGGCAGTT CCCCCGAACT GGAAGAAATC
TGCGCCGAGT ACGGCCAGGC CCTGGGCACC GCTTTCCAGG TCATTGACGA CGTGCTTGAC
TACACTGGTG AGGCGGCGGT CATGGGCAAG AACCTGGGCG ATGATCTGCG CGAGGGCAAG
ACCACGTTGC CGCTGATTGC CGCCATGCAA CGCGGCACTG CCAGCCAGAG CGCGCTCATC
AAAGAGGCGA TTGAGACCGG CGGCGTGGCC ATGCTGGATC AAGTCATCGA CATCGTCAAA
ACCACCGGCG CGCTTGATGT GGCCCACTTG GCCGCGACCC AGGAGGCGCA ACGCGCCATC
GCCGCAGCCA GGCAACTCCC GGCCGGTCCG CACACTGAGT GTTTGCTACA ATTGGCGGCT
CAGTTGCTTG AACGCCAGTC TTAA
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| Protein sequence | MQVNPSSPKP SLSVIAQDMR EVDQVIAHRL DSGVPLVGQV ARYIIAAGGK RLRPALLLLI
CGALGFKGAQ RFNLAAVVEF IHTSTLLHDD VVDDSSLRRG NPTANETFGN PASVLVGDFL
YSRCFQMMVD AQNMRIMQVL ADATNVIAEG EVQQLMNMHN AELDEAGYLQ VIRSKTAKLF
EASARVGAIL AGSSPELEEI CAEYGQALGT AFQVIDDVLD YTGEAAVMGK NLGDDLREGK
TTLPLIAAMQ RGTASQSALI KEAIETGGVA MLDQVIDIVK TTGALDVAHL AATQEAQRAI
AAARQLPAGP HTECLLQLAA QLLERQS
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