Gene Rfer_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1238 
Symbol 
ID3961228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1333110 
End bp1334048 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content56% 
IMG OID637916052 
ProductWxcM-like 
Protein accessionYP_522503 
Protein GI89900032 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.219256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAC CTTTCATCCA CACCCTGGCC GACGTCCATT CCACCACCAT TGGTACCGGC 
ACACGTATCT GGCAGTTCGT TGTGGCGCTG GCCGGTGCCA AGATCGGCCA AGACTGCAAC
GTCTGCTCGC ACTGCCTGAT TGAAAACGAC GTCGTCATCG GCGACCGCGT TACCGTCAAG
AGCGGCGTGC AGCTGTGGGA CGGTTTGCGC GTGGGCGACG ATGTTTTTAT CGGTCCCAAC
GCGTCGTTTG CCAATGATCG GTTTCCGCGC AGCAAGATAA CGCCTGAAAA GTTCCTGCAA
ACGGAGGTGG AAAAAGGTGC GTCGATAGGC GCGGGTGCAA CCATCCTGCC AGGCATCACG
ATTGGCCGCA ATGCCATGGT GGCCGCAGGT GCCGTGGTAA CTCGCTCAGT GCCGCCAAAC
GCAATCGTCG TTGGCAACCC TGCCAAAATC GTCGGCTATG TTGACGCTGA CCGAAACAAG
GGGGATATCG GCGAAGGCCA GGCTGTTATT GTTGGTGCAC AGGAAACTCA GGTTAGGGGC
GTTTCACTGC ATCGCATGCC TCGGGTTATT GATATTCGCG GCAGCCTGAC GGTGGGTGAG
TTTGATCGCA GCATCCCCTT CGCGGTGAAG CGCTATTTTA TGGTGTTTGA CGTGCCCAGC
ATGGAAACCC GTGGTGAGCA TGCGCACCGT GTGTGCCACC AATTTTTGAT TTGTGTTCGT
GGCTGTTGTG CGGTGGTTGC CGACGATGGC ACGCATCGCC AGGAGTTCTT GCTCGACAGG
CCAGACGTGG GCATTCACCT GCCGCCCATG GTCTGGGGCA TTCAATATAA ATATTCAGCC
GATGCCGTTT TACTGGTGTA CGCATCGCAC TACTACGACA ACGCAGATTA CATTCGTAAC
TACTCAGAGT TTCGTCAATT GGTGGGAGCC TCGGCATGA
 
Protein sequence
MSQPFIHTLA DVHSTTIGTG TRIWQFVVAL AGAKIGQDCN VCSHCLIEND VVIGDRVTVK 
SGVQLWDGLR VGDDVFIGPN ASFANDRFPR SKITPEKFLQ TEVEKGASIG AGATILPGIT
IGRNAMVAAG AVVTRSVPPN AIVVGNPAKI VGYVDADRNK GDIGEGQAVI VGAQETQVRG
VSLHRMPRVI DIRGSLTVGE FDRSIPFAVK RYFMVFDVPS METRGEHAHR VCHQFLICVR
GCCAVVADDG THRQEFLLDR PDVGIHLPPM VWGIQYKYSA DAVLLVYASH YYDNADYIRN
YSEFRQLVGA SA