Gene Rfer_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1146 
Symbol 
ID3963452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1231402 
End bp1232700 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content58% 
IMG OID637915964 
Producthypothetical protein 
Protein accessionYP_522415 
Protein GI89899944 
COG category[S] Function unknown 
COG ID[COG5368] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG ACAAACCCAC GATTGACGCC GAGCTGGAAT CGCTTCAACG CGATACCTTC 
CGCTACTTTC TGCTCTGGAC CAATCCGCAA AATGGACTGG TGCTCGATAA GACTGCGGCG
AATTGGCCCG CCAGCATTGC TGCCACCGGC CTCGCCCTGG CGGCGTATCC GGTCGCAGTT
GAGCGCGGCT TCATCACGCG CGCAGCGGCA ATCGGGATAG TACTGACCAC ACTGCGATTC
TTTTGGAACA GCCCGCAAGG TCCCGAGCCC GACGCCACCG GTTACCAAGG CTTTTATTAT
CATTTTCTCG ACATGCAGAC CGGACGGCGT GCCTGGCAAT GCGAATTGTC GACTGTGGAC
AGCGCCATTC TGCTCGCCGG TGCGTTGACT GTTGGCGCCT ATTTCAATGC GGATACGACT
GAGGAAAAGG AAATACGCGC CGTCGCTGAC GAACTTTATC GCCGTGCTGA TTGGTCGTGG
GCGCAAAACG GTGGCCTAAC GGTGACGCAC GGTTGGAAGC CTGAAAGCGG ATTTCTCGCG
TACCGTTGGG AAGGCTACGA CGAGGCGCTT GTACTGTATA TCCTGGGACT CGGCTCGCCC
ACCCATCCGC TGCCGCAGAG CAGCTACGCA GCGTGGGCTT CCACTTACGA ATGGAAAAAT
AGTTACGGAT ACGATTATCT TTACGCCGGG CCGTTGTTCA CGCATCAGAT TTCGCATCTC
TGGATCGATT TTCGTGGCAT TCAGGACGCG TTCATGCGCG AAAAAGGCAT CGACTATTTC
GAGAACACCC GCCGCGCAAC CTATGTGCAG CAACAATACG CGATCGACAA TCCGCTCAAG
TTCGCGGGTT ATGGCAAACA CTGCTGGGGA ATCACCGCGA GCGACGGCCC CGGTCCCGAG
ACCGTCAAAG TGAAAGGCAT CGAGCGCCAC TTCCTCGATT ACGTGGGACG AGGAGTGCCA
TATGGACCCG ACGATGGCAC CATCGCGCCG TGGGCGGTGG TGGCGTCGCT ACCGTTCGCG
CCGGAGATCG TGTTGCCGGC AATCGACTTT CTGGTGCATG AGGTCGAACT GAAAACGGGC
AATCCCTGCG GCTTCAAGGC AACGTTCAAT CCGACCTACC CGCACAAGCG CAGCAATCCC
CACGGCTGGG TATCGCCGTG GCATTACGGC CTGAATCAGG GACCGATCGT TTTGATGATC
GAGAATTACC GCACCGGTCT CTTGTGGCGG CTCATGCGAG ATAGCTCTTA TATCGCCAGC
GGCTTGCAAC GTGCGAGTTT TAGCGGCGGG TGGTTATGA
 
Protein sequence
MNTDKPTIDA ELESLQRDTF RYFLLWTNPQ NGLVLDKTAA NWPASIAATG LALAAYPVAV 
ERGFITRAAA IGIVLTTLRF FWNSPQGPEP DATGYQGFYY HFLDMQTGRR AWQCELSTVD
SAILLAGALT VGAYFNADTT EEKEIRAVAD ELYRRADWSW AQNGGLTVTH GWKPESGFLA
YRWEGYDEAL VLYILGLGSP THPLPQSSYA AWASTYEWKN SYGYDYLYAG PLFTHQISHL
WIDFRGIQDA FMREKGIDYF ENTRRATYVQ QQYAIDNPLK FAGYGKHCWG ITASDGPGPE
TVKVKGIERH FLDYVGRGVP YGPDDGTIAP WAVVASLPFA PEIVLPAIDF LVHEVELKTG
NPCGFKATFN PTYPHKRSNP HGWVSPWHYG LNQGPIVLMI ENYRTGLLWR LMRDSSYIAS
GLQRASFSGG WL