| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1111 |
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| Symbol | |
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| ID | 3964349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1191207 |
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| End bp | 1192577 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637915932 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_522383 |
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| Protein GI | 89899912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | [TIGR03356] beta-galactosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AAAAAACTGA TGATCTGCCC CTTCTGAAAA GGACTGACTT TGCGCTTGAC
TTTCGTTGGG GCTGCTCCAC ATCTTCATAC CAGATCGAAG GCGGGGTCGA TCTGGATGGC
CGGGGCGAGT CAATTTGGGA TCGCTTCTGC GCCACACCGG GACATATTCG GGATGGTTCC
AGTGGCGCTG TGGCTTGCGA CCACTACCAC CGCTGGCCGG AAGATCTTGA TCTAGCGCGC
AGCCTTGGAA CCAACGCCTA CCGGTTTTCC ATCGCATGGC CGCGAATTTT TGCTAATGGT
CGAGGGTTGG CGCCGAATCA AAAGGGCCTG GACTTCTACT CGCGCATGGT GGACGGCATG
CTGGAGCGGG GGCTGGAGCC CTGGGTCACT TTGTACCACT GGGATTTGCC GCAAGCCTTG
CAGGAACAGG GCGGTTGGGC AAACCGTGAC ACCGTGGATG CTTTTGTTGA GTACACCGAC
GTTGTGAGCC GCCACCTGGG GGACCGCATC AAGCACTGGA TTACCCACAA CGAGCCTTGG
TGCACCGCCT TCCATGGCAA TTACGAAGGT GTGCATGCAC CGGGCCTGAA GGACGTCAAG
ACCGCGCTGC AGGTGTGCCA CAACGTGCTG GTATCGCACG GCCTCGCCAT TCCCGTGATC
AGGCGCAATG TGCCTGGTGC GCGTGTGGGC GCGGCGCTCA GCCTGCATCC CCTGCAGCCC
GCCTCCGACA GTGCGCAGGA TGTGGCGGCG ACGAAGCGCC ATGACGGCTT GCGCAACCGC
TGGTTTCTCG ACCCCCTGCA TGGCCGCGGT TATCCGGCGG ACATCTGGCG CATTCTGGGT
GACAAGGCGC CTGTGGTGCA GGACGGTGAC CTGGCGACCA TTGCCACGCC CACGGACTTC
CTGGGTGTGA ACTATTACTT TCCGGAAATC GTGGCCGATG CGCCCGGCGT GGGGGTGATG
TCCACGCAGG TGATCGAATC GGACAACGTG GAGCGCACCG CATTTGGCTG GGAGGTATCG
CCCGAGGGCA TGGTGACCCT GCTTGGCCGG TTGGCAAAAG ACTATCAGCC GGCAGAGATC
TACCTCACCG AAAACGGCTC CACCTACGAC GACGTGCTTA GCCCTGAGGG CAATATTGAC
GACGTCGAGC GTCGCCGCTA TCTGGTGCGC CACCTGCAGG CTACCCGGGA AATCGTGGCC
CAGGGCATTC CGGTCAAGGG CTACTTTGCC TGGAGCCTGC TGGATAATTT TGAGTGGGCT
GAAGGCTACA TACGCCGCTT CGGTTTGACC CATGTTGATT TTGAGACTCA GCAGCGCCGC
CTGAAACTGA GTGGAGAATG GTACGGTGCC TTTCTAAAGG GAGAGCTCTG A
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| Protein sequence | MKNKKTDDLP LLKRTDFALD FRWGCSTSSY QIEGGVDLDG RGESIWDRFC ATPGHIRDGS
SGAVACDHYH RWPEDLDLAR SLGTNAYRFS IAWPRIFANG RGLAPNQKGL DFYSRMVDGM
LERGLEPWVT LYHWDLPQAL QEQGGWANRD TVDAFVEYTD VVSRHLGDRI KHWITHNEPW
CTAFHGNYEG VHAPGLKDVK TALQVCHNVL VSHGLAIPVI RRNVPGARVG AALSLHPLQP
ASDSAQDVAA TKRHDGLRNR WFLDPLHGRG YPADIWRILG DKAPVVQDGD LATIATPTDF
LGVNYYFPEI VADAPGVGVM STQVIESDNV ERTAFGWEVS PEGMVTLLGR LAKDYQPAEI
YLTENGSTYD DVLSPEGNID DVERRRYLVR HLQATREIVA QGIPVKGYFA WSLLDNFEWA
EGYIRRFGLT HVDFETQQRR LKLSGEWYGA FLKGEL
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