Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1110 |
Symbol | |
ID | 3964348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1189895 |
End bp | 1191130 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637915931 |
Product | extracellular solute-binding protein |
Protein accession | YP_522382 |
Protein GI | 89899911 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0139598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGTTT TAAGAAAAAT GGCGACGGCA CTGGCCGCTG GCCTGGGTGT TTGTGTTGCC GCGCACGCGG TCGGCCCTAA AGCCGAGGTG ATTCACTGGT GGACCTCCGG CGGCGAATCC GCTGCGGTGA AAGTGTTTTC CGACGCCTAC ACCACCACCG GCGGTGTCTG GGTCGATACG GCCGTGGCAC TCGGTGAGCA GGCGCGCTCC GTGGCCATCA ACCGTATCGT CGGGGGTAAC CCACCGACAA TGGCGCAGTT CAATACTTCC AAGCAGTTCT TGGACGTCGT CGAGCAGGGC ATGCTCAACA ACGTGGACGA GGTCGCCATC CGCGACGGGT GGGACAAATT CCTACCCGAA ACCGTGCTCA ATGTGGTGAA AGTCAAAGGG CACTACTACG CCGCGCCCGT GAACATCCAC ATGCCGACCT GGTTCTGGTA TTCCAAGGCC GCGTTCAAAA AGGCGGGCAT CGCGGCCGAG CCCAAAAATA TGGACGAGTT GTTCGCGGCG CTGGACAAGC TCCAGGCCGC CGGGCTGATT CCCCTGGCGC ACGGCGGCCA ACCGTGGCAG GAGAACACTA TTTTTACCGC CGTGCTGGCG AACGTCGGCG GCACCGAGCT CTACCTGAAA GTGATGCGTG ACCGCGATGC GAAAGCGATT CAGGGCGAGG CTTTCAAGAA TGTGTTGCTG ACCTACAAGC GACTTCAATC CTACGTGGAC AAGGGTTCTC CGGGGCGCAA CTGGAACGAC GCCACCGCGC TGCTGATCAC GGGCAAGGCC GGTGTGCAAA TCATGGGCGA CTGGGCCAAG GGCGAGTTCA CGGCGGCAAG GCAGGTGCCG GGCAAGGACT ATGGCTGCAT TGCGGGTTTT GGGTCCAAGT CACCCTACAT CATTCAGGGC GACGTGTTCG TCTTTCCCAA GACCACGAAT CCTGAGCAGA TCAAGGCGCA AAAGGTGCTG GCCGGCCTCA TGCTGGCACC CGCCGTGCAG GTGGAGTTCA GCAACAAAAA AGGTAGCATT CCCGTGCGCA CCGACGTGGA CTCGTCCAAG ATGGACATCT GTGCCCAGCA GGGACTGGCC ATCATGAAAG ATAAATCGCG CCAGTTGGGC AACGGCGAGA TCTACCTCAA CCCCGATCAG AATGGCGCGC TGGCTGACAT CCTGACCGCC TACTGGAACA AGAGCGTTCC CGTCGAAAAG GTCCAGAAGG ACATTGCAAA CGCGTTGAAG AACTGA
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Protein sequence | MVVLRKMATA LAAGLGVCVA AHAVGPKAEV IHWWTSGGES AAVKVFSDAY TTTGGVWVDT AVALGEQARS VAINRIVGGN PPTMAQFNTS KQFLDVVEQG MLNNVDEVAI RDGWDKFLPE TVLNVVKVKG HYYAAPVNIH MPTWFWYSKA AFKKAGIAAE PKNMDELFAA LDKLQAAGLI PLAHGGQPWQ ENTIFTAVLA NVGGTELYLK VMRDRDAKAI QGEAFKNVLL TYKRLQSYVD KGSPGRNWND ATALLITGKA GVQIMGDWAK GEFTAARQVP GKDYGCIAGF GSKSPYIIQG DVFVFPKTTN PEQIKAQKVL AGLMLAPAVQ VEFSNKKGSI PVRTDVDSSK MDICAQQGLA IMKDKSRQLG NGEIYLNPDQ NGALADILTA YWNKSVPVEK VQKDIANALK N
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