Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1096 |
Symbol | |
ID | 3963480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1173401 |
End bp | 1174285 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637915917 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_522368 |
Protein GI | 89899897 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0124615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATGA AATCATTTGA AAACGTGTTA CCCAAGCTGG TAATTGCGCC GGGCTTTGTG CTCGGATTCG CCTTCATTTA CGGCTTCATG ATCTGGAACG GCGTGCTCTC CGTGACCAGC TCCCGCATGT TGCCCAACTA CGACGAATTC GTCGGGCTGG AACAGTACGT GAGCCTGTGG GAGATGGACC GCTGGCTCGT CGCGTTGAAG AATCTGGGTA TTTTCAGCGT GCTGTATGTC GGTGGTTCGA TGTTTCTGGG CATGGGCTTG GCGATTTTTC TGGATCAAAA AATTCGTTTT GAGGGTGTGC TGCGCACCGT CTATCTGTAC CCGATGGCGC TGTCGTTCAT TGTGACCGGC ACCGCGTGGA AATGGATTTT GAACCCGAGC CTGGGGCTGG AAAAACTGAT GCATGACCTG GGTTGGGCCA GCTTCCACTT TGACTGGCTG GTGCAAAGCG ACACCGCCAT CTATTGCGTG GTGATCGCCG GCATCTGGCA GTCGGCCGGG TTTGCCATGG CGCTGTCGCT GGCAGGCTTG CGCGGCATTG ACGACAGCAT CATCAAGGCG GCGCAAATTG ATGGCGCTTC CTTGCCGCGC ATTTACTGGC GCATTATTCT GCCGATCCTG CGCCCGGTGG TGTTCTCCAC GGTGCTGGTG CTGTCGCATC TGTCAATCAA GAGTTTCGAC CTGGTCATGG CTTTGACCGC GGGCGGCCCC GGCTACTCGT CGGATGTGCC GGCCACTTTC ATGTATGTGA TGAGTTTTAC CCGCGGCCAG ATCGGCTTGG GCGCGGCCAG CGCCACCATG ATGCTCGCCA CCGTGGCGGC CATCGTCGTC CCTTACCTTT ACAGCGAGCT GCGGGCCAAG CCGCACGAGC GCTGA
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Protein sequence | MFMKSFENVL PKLVIAPGFV LGFAFIYGFM IWNGVLSVTS SRMLPNYDEF VGLEQYVSLW EMDRWLVALK NLGIFSVLYV GGSMFLGMGL AIFLDQKIRF EGVLRTVYLY PMALSFIVTG TAWKWILNPS LGLEKLMHDL GWASFHFDWL VQSDTAIYCV VIAGIWQSAG FAMALSLAGL RGIDDSIIKA AQIDGASLPR IYWRIILPIL RPVVFSTVLV LSHLSIKSFD LVMALTAGGP GYSSDVPATF MYVMSFTRGQ IGLGAASATM MLATVAAIVV PYLYSELRAK PHER
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