Gene Rfer_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1090 
Symbol 
ID3963474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1165735 
End bp1167036 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID637915911 
Productmetal dependent phosphohydrolase 
Protein accessionYP_522362 
Protein GI89899891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCT ACCTGGTCGG TGGTGCTGTG CGCGATGCCC TGATGGGCTT GCCGGTGACG 
GACCGCGACT GGGTGGTGGT CGGTGCCACG CCGGATGAGC TGGTCGCGCA GGGCTTTGTG
CCGGTGGGCA AGGACTTTCC GGTGTTTTTG CATCCGCAAA CCCACGAGGA ATATGCGCTG
GCACGCCTTG AGCGCAAAAC TGCGCCCGGT TACCACGGTT TTGCCGTTCA CGCCGCGCCC
GATGTGACGC TGGAAGAAGA CCTGGCGCGG CGCGATTTGA CTATTAATTC AATAGCTATT
GATGCAGATT ACATAAGGGC TAAAGGCTTA TTTGATATCA AAAGCTCGGA AACGGCGCCG
GCTGCCTTGG TCGATCCTTT CAACGGCCGG CAGGACATCG CTGACAAAAT ATTTCGCCAC
GTCAGCGCCG CTTTTTGTGA AGACCCGGTG CGCATCCTGC GCCTGGCTCG TCTGGCCGCG
CGCTTTCCCG ACTTCAGCGT GGCCCCCGAG ACGCTGCAAC TCATGCTTGA GATGGTGCAC
AGCGGCGAGG TCGATCATCT GGTGGCCGAG CGCGTCTGGC AGGAGCTCTC CCGTGGGCTG
ATGGAGGCCA CGCCCTCACG CATGTTCGAG GTGTTGCGCG AATGTGGGGC GCTGGCCAGA
ATCCTGCCGG AGGTCGATCG ACTCTGGGGC GTGCCGCAGC GTGCCGATTA CCACCCCGAA
ATCGACACCG GCGCACACCT GGCGCTGGTG CTCGACATGG CGGCCCGCCT GGGCGCTGAC
CTGCCGGTGC GACTGGCCTG TCTGACGCAC GACCTGGGCA AGGGCACCAC GCCGGCCGAC
ATTTTGCCGC GCCACCTCGG GCATGAGCAG CGCAGTGCGC AACTCCTCAA GGGCCTGGCT
GAGCGGCTGC GCCTGCCCAC CGATTGCCGG GAGCTGGCCG ACGTGGTGGC GCGCGAGCAC
GGCAATATTC ACCGCAGTGG CAATCTCGAC GCTGCTGCAC TGGTACGCCT GCTGGAGCGC
TGCGATGCCT TTCGCAAGCC GCAGCGCCTT GGGCAAATCT TGCTGGCCTG CGAGTGTGAC
GCGCGCGGGC GGCTGGGGCT GGCCGAGTCA CCCTATCCGC AGCGGCCCCG GCTGCTGTCG
GCCTTGTCGG CCGCGCAGGG TGTTGTTACA GAAAAGATAG CGTCTGACGC AATGGCGACG
GGGGCTAGCG GCCAGAAAAT AGGTGAACTG ATTCATCTGG CGCGGGTTCA GGCGGTCCAG
GCCCGGCTGC AGTGCCCGCT GCCCGCCACC CCGGCGCATT GA
 
Protein sequence
MQIYLVGGAV RDALMGLPVT DRDWVVVGAT PDELVAQGFV PVGKDFPVFL HPQTHEEYAL 
ARLERKTAPG YHGFAVHAAP DVTLEEDLAR RDLTINSIAI DADYIRAKGL FDIKSSETAP
AALVDPFNGR QDIADKIFRH VSAAFCEDPV RILRLARLAA RFPDFSVAPE TLQLMLEMVH
SGEVDHLVAE RVWQELSRGL MEATPSRMFE VLRECGALAR ILPEVDRLWG VPQRADYHPE
IDTGAHLALV LDMAARLGAD LPVRLACLTH DLGKGTTPAD ILPRHLGHEQ RSAQLLKGLA
ERLRLPTDCR ELADVVAREH GNIHRSGNLD AAALVRLLER CDAFRKPQRL GQILLACECD
ARGRLGLAES PYPQRPRLLS ALSAAQGVVT EKIASDAMAT GASGQKIGEL IHLARVQAVQ
ARLQCPLPAT PAH