| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1084 |
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| Symbol | |
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| ID | 3963507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1158783 |
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| End bp | 1160201 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915905 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_522356 |
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| Protein GI | 89899885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTTTTTGA TCTCTTCAAG ATTGGTATCG GACCGAGCAG CTCGCACACG
GTGGGGCCGA TGCGCGCGGC GCGCCTGTTT GCCCAGACGC TGGAGCGCGA GCACTGGCTC
GACGCCACCC AGGGCGTGAC CTGCGAGCTG TATGGCTCAT TGGGTGCCAC CGGCAAAGGC
CACGGCTCCG ATGTGGCGGT CATGCTCGGC TTGATGGGCC ACGCGCCCGA CACGGTGGAC
GTGGCTGCGG TATCCGGCCT GATCCAGACC GTGCGTGCCC AGCAGACGCT GGCGCTGCTG
GGCGTCAAAC CCATTGTGTT CAAGGAAAAA GAGCACGTGC TGATGTACCG CCGCGAGGCC
CTGGCCGAGC ATCCCAACGG CATGAAGTTC AGTGCGGTGG ACGCGCAGGG CCAGTTGCTC
CGGCAAGCCA AGTACCTCAG CGTCGGCGGC GGTTTTGTGG TCACCGCTGG CAGCTCCAAT
GAGGCCGTGC TGAGCGAGTA CCAGAAAGTG CCTTACCCCT TCACCTCGGG CGCTGAACTG
CTGGCGACTT GCCAGCAGCA GCGCTTGAGC ATTGGCGAGT TGATGTGGGC CAACGAGCGC
ACCTGGCGCA GCGATGATGA AATTCGTGCC GGTTTGCTCA ACATCTGGCG CGTCATGCGC
GAATGCGTGC AACGCGGCCT GAGCGCGCAG GGCCTGCTAC CCGGTCCGTT CAAGGTGCAG
CGCCGTGCCC CGGTGCTGGC GGCCCAGTTG CGCGAGCGTG CCGAGCAAGC GCTGGCCGAT
CCGTTGTCGG TGCTGGACTG GGTCAATGTC TATGCCTTTG CCGTGAATGA AGAAAACGCC
GCCGGCGGGC GCGTGGTGAC TGCGCCGACC AACGGCGCGG CCGGGGTCAT TCCGGCGGTG
CTGCACTACT GCGACCGCTT TGTGCTGAGC CAGCACGCAC GCACAGCGCA GACCGACGCC
ACCGGGCACA ACAGCGCCGA CGACGCGGTG ATCAATTTCC TGATGAGTGC GGCGGCCATC
GGCATGTTGT ACAAGCTCAA TGCCTCCATC AGCGGCGCCG AAGTGGGTTG CCAGGGCGAG
GTTGGCGTGG CCTGCTCGAT GGCCGCCGCC GGCTTGACCG CGGTGATGGG CGGCAGCCCC
GAGCAGATTG AAAACGCCGC CGAGATCGGC ATGGAGCACA ACCTGGGCCT GACCTGCGAC
CCCATCGGCG GCCTGGTGCA GGTGCCCTGC ATTGAACGCA ACGCCATGGG CGCGGTCAAG
GCTGTGAACG CGGCGCGCAT GGCGCTGGCG GGCAACGGCC AGCACGTGGT GTCGCTCGAC
AAGGTGATCA AGACCATGCG CGAGACCGGC GCCGACATGA AAACCAAATA CAAGGAAACC
TCGCGCGGCG GCTTGGCGGT CAATATTGTG GAATGTTAG
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| Protein sequence | MAISVFDLFK IGIGPSSSHT VGPMRAARLF AQTLEREHWL DATQGVTCEL YGSLGATGKG
HGSDVAVMLG LMGHAPDTVD VAAVSGLIQT VRAQQTLALL GVKPIVFKEK EHVLMYRREA
LAEHPNGMKF SAVDAQGQLL RQAKYLSVGG GFVVTAGSSN EAVLSEYQKV PYPFTSGAEL
LATCQQQRLS IGELMWANER TWRSDDEIRA GLLNIWRVMR ECVQRGLSAQ GLLPGPFKVQ
RRAPVLAAQL RERAEQALAD PLSVLDWVNV YAFAVNEENA AGGRVVTAPT NGAAGVIPAV
LHYCDRFVLS QHARTAQTDA TGHNSADDAV INFLMSAAAI GMLYKLNASI SGAEVGCQGE
VGVACSMAAA GLTAVMGGSP EQIENAAEIG MEHNLGLTCD PIGGLVQVPC IERNAMGAVK
AVNAARMALA GNGQHVVSLD KVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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