Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1019 |
Symbol | |
ID | 3963734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1075497 |
End bp | 1076750 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637915842 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_522293 |
Protein GI | 89899822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.530508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCG GATACACAGA AAAAGTAAGC GCGCTGCAAG AAAAGCTGCT GACCTTTATG GACGACCACG TGTTGCCGGC CAACGCCGAG TGGGTCAGGA TCACGGGTCA GGGCGAATAC CCGATGGCTC TGATCGATGA TCTCAAAGGC AAGGCTAGGG CGCAGGGCTT GTGGAACCTG TTCTTGCCGG GTTTGAAGGC TGATGAACCT GGTGTGCAAC TTGCCAACCT GGAATACGCG CCTCTGGCCG AGATAATGGG GCGACTCTCC TGGGCTTCAG AAATCTTCAA TTGCAATGCA CCCGATACCG GGAACATGGA ACTACTGCAC TTGTTCGGGA CGCCTGAGCA GAAGGCGGCC TGGCTGACGC CGCTGCTTGA AGGGCAGGTG CGTTCATGCT TTGGCATGAC CGAGCCGGAC GTCGCTTCAT CCGACGCAAC CAACATCTCA ACTTCGATCA GACGCGACGG CGATCATTAC CTGATCAACG GGCGCAAGTG GTTTACCACA GGGGCGATCC ACCCCAATTG CAAGCTTTGC ATCGTGATGG GCGTGACCGA CTCGGATCCC GAAGCCAATG CACACAGCCG CCATTCCATG GTGCTGGTTC CAATGGACAC CCCGGGCTTC TCGATTGTGC GCAATGTGCC CATCATGAAC CACCATGCCC CCGAGGGCCA TTGCGAGGTA ATTTTTCGCA ATGTGCGGGT TCCGGTCTCC AACCTGCTCG GCACGGAAGG CAAAGGCTTT GCGCTGGCTC AGGCACGCCT CGGACCGGGC CGTGTTCACC ATTGCATGCG CACGATCGGC CAATGCGAGT TGGCACTGGA GATGATGTGC GAGCGAGCAC TGGGGCGTGT CGCATTCGGC AAGCATCTGA GCGACTTTGC CAATGTGCAG GACTGGATCG CGCAATCGCG TGTCGAAATT GACCAAGCCC GCTTGTTGGT GTTGCGTGCG GCCTGGCTCA TGGACCAGAA AGGAAATGCA GCGGCCCGGG TCGATGTGTC GGCGATAAAG TTGGTGGCTG CGCAATTGCA GACCAAGGTT GTCGACCGGG CGATCCAGGT TTTTGGCGCC ATGGGGCTCA CCCCCGACAC GCCGCTGCCC GACTTGTGGA CCTGGGGTCG CGCCATGCGC TTCTTTGACG GTCCCGACGA GGTCCATCTG CGCACCATTG CCCGACAGGA ATTGAGTGTT GTGCGTAAGA ACCTGGGGCG GACCGCTCTC TATTACAACC TTCCAACACG TTAA
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Protein sequence | MDFGYTEKVS ALQEKLLTFM DDHVLPANAE WVRITGQGEY PMALIDDLKG KARAQGLWNL FLPGLKADEP GVQLANLEYA PLAEIMGRLS WASEIFNCNA PDTGNMELLH LFGTPEQKAA WLTPLLEGQV RSCFGMTEPD VASSDATNIS TSIRRDGDHY LINGRKWFTT GAIHPNCKLC IVMGVTDSDP EANAHSRHSM VLVPMDTPGF SIVRNVPIMN HHAPEGHCEV IFRNVRVPVS NLLGTEGKGF ALAQARLGPG RVHHCMRTIG QCELALEMMC ERALGRVAFG KHLSDFANVQ DWIAQSRVEI DQARLLVLRA AWLMDQKGNA AARVDVSAIK LVAAQLQTKV VDRAIQVFGA MGLTPDTPLP DLWTWGRAMR FFDGPDEVHL RTIARQELSV VRKNLGRTAL YYNLPTR
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