| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1008 |
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| Symbol | |
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| ID | 3963723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1062566 |
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| End bp | 1063537 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915831 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_522282 |
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| Protein GI | 89899811 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGC GAGTCACCGA ACTGCTGGGA ATCCGCTACC CGATCATCCA GGGCGGCATG
CAATGGGTGG GCACTGCCGA TCTGGCGTCC GCCGTCTCCA ATGCCGGCGG GCTGGGCGTG
CTGACTGCGC TGACACAGCC ATCACCCGAG GCGCTGGCGC GCGAGATCGA CCGTTGCCGG
AGCATGACCG ACCAGCCTTT TGGCGTCAAC CTCACCATCC TGCCCTCGGT GAATTCACCC
CCCTATGCCG AGTACATCGA GGTGGTGATC GACAAGGGTG TCAAGGTTAT CGAGACAGCG
GGCAACAGCC CCAAGGCGTT CATCGAGAAA CTCAAGCAGA ACGGGGTTCG CATCGTGCAC
AAGTGCACCA GCGTACGACA TGCCTTGTCG GCCGAGCGCA ATGGCGTCGA TGCGGTGAGC
ATCGACGGCT TTGAGTGCGC AGGTCACCCG GGTGAAGATG ACGTGCCGGG ACTGGTACTG
ATTCCACTGG CGACGCGGGC TCTGCGCATT CCGGTGGTCG CTTCCGGTGG CATCGCCGAC
GGCCGTGGGA TGGCTGCCGC CATGGCGTTG GGGGCTGAAG GGGTGAATAT GGGAACTCGC
TTCTGCGCCA CCGTTGAGGC ACCGATTCAC GAACAGATCA AGCAGGCACT GGTGCGCGCC
AGCGAACGCG ACACCAAATT GATTTTTCGC ACTTTGCACA ACACCGGGCG CGTCCTCAGG
AACGCCGTCT CCGACGAGGT GGTGGCCACC GAGCAGCGGC CGGGTGGCTG CGAGTTTGCC
GACGTCCAGT TGCTGGTTTC GGGCCAGCGC GGCCGCTTTG CGCTGCAGAG CGGAGAACTT
GACGCCGGCT TGGTCTGGGC TGGGCAGGTG GTGGGTTTGA TCGACGACAT ACCGACTTGC
TATGAGTTGC TGCAGCGCAT CGTTGCGCAG TGCCGCGAGA GTCTGGCACG CGCCAGCGCG
CTGGCGGCTT GA
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| Protein sequence | MKTRVTELLG IRYPIIQGGM QWVGTADLAS AVSNAGGLGV LTALTQPSPE ALAREIDRCR
SMTDQPFGVN LTILPSVNSP PYAEYIEVVI DKGVKVIETA GNSPKAFIEK LKQNGVRIVH
KCTSVRHALS AERNGVDAVS IDGFECAGHP GEDDVPGLVL IPLATRALRI PVVASGGIAD
GRGMAAAMAL GAEGVNMGTR FCATVEAPIH EQIKQALVRA SERDTKLIFR TLHNTGRVLR
NAVSDEVVAT EQRPGGCEFA DVQLLVSGQR GRFALQSGEL DAGLVWAGQV VGLIDDIPTC
YELLQRIVAQ CRESLARASA LAA
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