| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0998 |
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| Symbol | |
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| ID | 3963713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1052197 |
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| End bp | 1052979 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915822 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_522273 |
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| Protein GI | 89899802 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACTCA ATTCAAAAAT TGCTGCCGTC GTCACCGGCG GCGCCTCTGG CCTAGGCGCT
GCCACGGCCC GCCGTCTGGC TTCCCATGGC GTCAAGGTGG CGCTGTTCGA TCTAAATGTG
GCCCAGGGCG AAGCCCTGGC GCAGGAGATT GGCGGGGTCT TCTGCCAAGT AGATGTCACC
TCCGAGGAGC AGGTCGACGC GGCCTTCGCC AGGGCGCGTT CAGTCAACGG CCAGGAGCGC
ATCCTGGTCA ATTGCGCCGG TACCGGCAAC GCCGTCAAGA CCGCCGGTCG CGACAAGACG
ACCGGCGATA TCAAGCACTA CCCGCTGGAC AATTTCGATC GCATCATCCA GATCAACCTG
GTTGGCACCT TCCGCTGCAT CGCCAAATCG GCGGCCGGCA TGCTGACCCT GGAGCCTCTG
GCGGACGGCG AGCGCGGCGC CATCGTCAAC ACCGCATCCG TGGCGGCACA GGATGGACAA
ATGGGTCAGG CCAGTTACGC GGCCAGCAAG GCCGGCATCG TCGGCATGAC CCTGCCGATT
GCGCGCGACC TGATGGGCGA AGGCATCCGT GTCAACACCA TCCTGCCCGG CATCTTCAAT
ACGCCCTTGC TGCAGGCAGC ACCGGACAAC GTCAAAGCGG CGCTGGCGGC ATCGGTGCCG
TTTCCGAAAC GCCTGGGCGA CCCGGCTGAA TACGCCCATC TGGCCGAGAC CATGATCGTC
AACGGCTACT TTAACGGCGA GAGTGTGCGG CTGGACGGCG CCATCCGCAT GGCGCCGCGT
TAA
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| Protein sequence | MQLNSKIAAV VTGGASGLGA ATARRLASHG VKVALFDLNV AQGEALAQEI GGVFCQVDVT
SEEQVDAAFA RARSVNGQER ILVNCAGTGN AVKTAGRDKT TGDIKHYPLD NFDRIIQINL
VGTFRCIAKS AAGMLTLEPL ADGERGAIVN TASVAAQDGQ MGQASYAASK AGIVGMTLPI
ARDLMGEGIR VNTILPGIFN TPLLQAAPDN VKAALAASVP FPKRLGDPAE YAHLAETMIV
NGYFNGESVR LDGAIRMAPR
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