Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0984 |
Symbol | |
ID | 3963583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 1033173 |
End bp | 1034114 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637915808 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_522259 |
Protein GI | 89899788 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.422815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCAAT ACCTTCTGCG CCGTTTCATC GCCGCGATCC CGGTGATGTT CCTCGTTTCC CTGATGTCGT TCGCAGTCAT CTGGCTGGTG CCTGGCGACC CGGCCTCGTC CTTCCTCGAC GCCAGCGCGA CCCAGGAGCA AATCGCCCGC ATACGCCAGG AACTAGGGCT GAACCAGCCG CTGTGGCAAC AAATGCTCCA TTGGTACGGC CGGGTGCTCA CGGGCGACCT CGGACAGTCG ATCCTGCTGC ACCGCAGCGT TGGCGAAGCG TTGCTGGAGC GCCTGCCCGT CACCCTGTCG CTGGCGGCGC TGGCGCTGGT ACTGGCCGCC GTGCTCGGCA TCTCGGCGGG CATCTTCGCC GCCATGCACC GGGGCGGCAT AGCTGACCGC ACGGTTATGA CGGCATCGCT GCTGGGCTTG TCTGTGCCCG ACTTCTGGCT CGGTCTGGTG ATGATCGTGG TGTTTGCCGT GGGCCTCGGC TGGCTGCCGT CCGGCGGCTT CGTGCCGATC ACCGAAAGTG TGGTCGGCTG GATGCGCACC ATGACGCTGC CGGCGCTGAC GCTGGCCTTG GTGCAAACCG GCTTCATCGC ACGCATGACC CGCTCTGCCA TGCTCGATGT GTTGCATCAG GACTTCATTC GCACCGCCGA CGCCAAGGGC TTGAAGCACG GCTTCGTCGT GTTGCGCCAT GGTTTGCCCA ACGCGATGCT GCCCATCCTC ACCGTGCTCG GCATCATCGC CGGCTCGCTG CTGGGCGGCG CTGTCGTCGT CGAGCAGGTG TTCTCGCTGC CCGGCGTCGG GCGTCTCATC ATCGGCGCCA TCATGAGCCG CGACTTCCCT GTCATCCAAG GCGGGCTGCT GTTCCTGGCT GCCATCTATG TCGTCATCAA CCTGATGGTC GATCTGCTGT ATGCGGTGGT CGACCCGCGA GTCAGACTGT GA
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Protein sequence | MPQYLLRRFI AAIPVMFLVS LMSFAVIWLV PGDPASSFLD ASATQEQIAR IRQELGLNQP LWQQMLHWYG RVLTGDLGQS ILLHRSVGEA LLERLPVTLS LAALALVLAA VLGISAGIFA AMHRGGIADR TVMTASLLGL SVPDFWLGLV MIVVFAVGLG WLPSGGFVPI TESVVGWMRT MTLPALTLAL VQTGFIARMT RSAMLDVLHQ DFIRTADAKG LKHGFVVLRH GLPNAMLPIL TVLGIIAGSL LGGAVVVEQV FSLPGVGRLI IGAIMSRDFP VIQGGLLFLA AIYVVINLMV DLLYAVVDPR VRL
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