Gene Rfer_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0984 
Symbol 
ID3963583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1033173 
End bp1034114 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID637915808 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_522259 
Protein GI89899788 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.422815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAT ACCTTCTGCG CCGTTTCATC GCCGCGATCC CGGTGATGTT CCTCGTTTCC 
CTGATGTCGT TCGCAGTCAT CTGGCTGGTG CCTGGCGACC CGGCCTCGTC CTTCCTCGAC
GCCAGCGCGA CCCAGGAGCA AATCGCCCGC ATACGCCAGG AACTAGGGCT GAACCAGCCG
CTGTGGCAAC AAATGCTCCA TTGGTACGGC CGGGTGCTCA CGGGCGACCT CGGACAGTCG
ATCCTGCTGC ACCGCAGCGT TGGCGAAGCG TTGCTGGAGC GCCTGCCCGT CACCCTGTCG
CTGGCGGCGC TGGCGCTGGT ACTGGCCGCC GTGCTCGGCA TCTCGGCGGG CATCTTCGCC
GCCATGCACC GGGGCGGCAT AGCTGACCGC ACGGTTATGA CGGCATCGCT GCTGGGCTTG
TCTGTGCCCG ACTTCTGGCT CGGTCTGGTG ATGATCGTGG TGTTTGCCGT GGGCCTCGGC
TGGCTGCCGT CCGGCGGCTT CGTGCCGATC ACCGAAAGTG TGGTCGGCTG GATGCGCACC
ATGACGCTGC CGGCGCTGAC GCTGGCCTTG GTGCAAACCG GCTTCATCGC ACGCATGACC
CGCTCTGCCA TGCTCGATGT GTTGCATCAG GACTTCATTC GCACCGCCGA CGCCAAGGGC
TTGAAGCACG GCTTCGTCGT GTTGCGCCAT GGTTTGCCCA ACGCGATGCT GCCCATCCTC
ACCGTGCTCG GCATCATCGC CGGCTCGCTG CTGGGCGGCG CTGTCGTCGT CGAGCAGGTG
TTCTCGCTGC CCGGCGTCGG GCGTCTCATC ATCGGCGCCA TCATGAGCCG CGACTTCCCT
GTCATCCAAG GCGGGCTGCT GTTCCTGGCT GCCATCTATG TCGTCATCAA CCTGATGGTC
GATCTGCTGT ATGCGGTGGT CGACCCGCGA GTCAGACTGT GA
 
Protein sequence
MPQYLLRRFI AAIPVMFLVS LMSFAVIWLV PGDPASSFLD ASATQEQIAR IRQELGLNQP 
LWQQMLHWYG RVLTGDLGQS ILLHRSVGEA LLERLPVTLS LAALALVLAA VLGISAGIFA
AMHRGGIADR TVMTASLLGL SVPDFWLGLV MIVVFAVGLG WLPSGGFVPI TESVVGWMRT
MTLPALTLAL VQTGFIARMT RSAMLDVLHQ DFIRTADAKG LKHGFVVLRH GLPNAMLPIL
TVLGIIAGSL LGGAVVVEQV FSLPGVGRLI IGAIMSRDFP VIQGGLLFLA AIYVVINLMV
DLLYAVVDPR VRL