Gene Rfer_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0911 
Symbol 
ID3963627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp955014 
End bp955778 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID637915739 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_522190 
Protein GI89899719 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAT CACCCTCCAT CGCTTTGGTC ACCGGCGGTA GCCGTGGTCT GGGCAAAAGC 
ACCGCACTCC ACCTGGCCAG GCAAGGCCAT GACGTCATCC TGACCTACCG TAGCAAACAG
GCAGAAGCTA ACGATGTCGT CGCGCAAATT GAGGCCATGG GCCAAAAGGC GGTGGCGCTT
GCGCTCAATG TTTCCGACAG CAGCAGCTTT GCAGGTTTTG CGGCCCAGGT GCGCGACGTG
CTTCTTGCGC AAGGGGGCCG CACGACATTC AATGTACTGA TCAACAACGC AGGCACCGGC
ACGCATGCAA GCCTGATGGA CACCACCGAG GTCCAGTTCG ATGAACTGGT CAACGTGCAC
TTCAAGGGCG CCTTCTTTCT GACGCAAAAA CTGCTTCCCC TGATGGCAGA CGGCGGACGC
ATCGTCAACC TGTCGTCCGG ACTGACGCGC TTTGCCTTGC CGGGCTACGC CGCATACGCC
TCCATGAAAG GCGCAGTGGA AGTCATGACC CGTTACATGG CCAAGGAACT TGGGCCACGG
GGTATTGCCG TCAACACGGT GGCACCCGGT GCCATTGCGA CCGATTTCGG TGGCGGCGCC
GTGCGCGACA CTCCGCAACT CAATGCAATT GTCGCGTCAC AGACTGCGCT GGGTCGCGTA
GGTGAAGCCG ACGACATCGG TGCCATGGTG GCCTCGTTGG TCTCACCTGC CAACCGTTGG
ATCAATGCAC AGCGCATTGA AGTGTCGGGG GGGATGTTCG TTTGA
 
Protein sequence
MQTSPSIALV TGGSRGLGKS TALHLARQGH DVILTYRSKQ AEANDVVAQI EAMGQKAVAL 
ALNVSDSSSF AGFAAQVRDV LLAQGGRTTF NVLINNAGTG THASLMDTTE VQFDELVNVH
FKGAFFLTQK LLPLMADGGR IVNLSSGLTR FALPGYAAYA SMKGAVEVMT RYMAKELGPR
GIAVNTVAPG AIATDFGGGA VRDTPQLNAI VASQTALGRV GEADDIGAMV ASLVSPANRW
INAQRIEVSG GMFV