| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0887 |
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| Symbol | |
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| ID | 3963661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 926941 |
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| End bp | 927732 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637915715 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_522166 |
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| Protein GI | 89899695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAA ACGGTCCCCT TGCCCTGCTC TTCAATGCCT TGGTCATTGC CTTCATGCTG
GCCCCCTTGC TGGTGGTCTG CGTGGTGGCC TTCACACCCG AGAACACGCT GACGCTGCCA
ACCAGCAGGT TCTCGCTGCG CTGGTTCGAG GCGGTGTTTG CCCACCCCGA TTTCATGCAG
TCGTTCTGGA ACAGCCTGTG GCTGGCGTTG GCATCGGCCA CGCTGGCAAC GCTGCTGGCG
GTGCCAGCGG GTATGGCCAT CACCCGCTAC ACCTTCCCGG GGCGGGGATT TCTGAACGGC
CTGTTTTTGT CACCCCTGAT CATTCCGCAC CTGGTGCTGG GCGTGGCGCT GTTGCGCCTG
TTTGCGCTGG TGGGCGGCAC TGGCAGCTTT GGCTGGCTGG TGCTGGCCCA TGCACTGATC
GTTACACCCT ACACGCTGCG CTTGGTGGTA GCGGCGCTGG TCGGCTTTGA CCGCAGCGCC
GAACAAGCGG CGCTGTCCCT GGGTGCCAGT CAGACCCAGA TGTTCACCCG CATCACCCTG
CCGATGATTC TGCCCGGTGT GACAGGGGGC TGGCTGCTGG CCTTCATCAA CAGTTTTGAC
GAAGTCACCA TGTCGATTTT TGTCACTTCG CCCAGCACGG TCACGTTGCC GGTGCGCATG
TACATGTACG CCACCGAGTC AATTGACCCG CTGATGGCGG CCGTGTCTGC CTTGATGGTG
GCGGTGACCG CGTTTGCCAT GATCATCCTG GACCGCGTCT ATGGCCTGGA CCGCGTGTTG
GTGGGGCGCT GA
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| Protein sequence | MRKNGPLALL FNALVIAFML APLLVVCVVA FTPENTLTLP TSRFSLRWFE AVFAHPDFMQ
SFWNSLWLAL ASATLATLLA VPAGMAITRY TFPGRGFLNG LFLSPLIIPH LVLGVALLRL
FALVGGTGSF GWLVLAHALI VTPYTLRLVV AALVGFDRSA EQAALSLGAS QTQMFTRITL
PMILPGVTGG WLLAFINSFD EVTMSIFVTS PSTVTLPVRM YMYATESIDP LMAAVSALMV
AVTAFAMIIL DRVYGLDRVL VGR
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