Gene Rfer_0874 details

Gene Information

• Locus tag: Rfer_0874
• ID: 3963648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 911834
• End bp: 912514
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637915702
• Product: GntR family transcriptional regulator
• Protein accession: YP_522153
• Protein GI: 89899682
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.366821
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAA AACTCCCGGC GAACACGTTG ACACTGAACG AACGTACGGC CGATCTGATT 
CGCCAGAAGA TTGTGAAAGG CGAGTTCTCG CCCGGCCAGC GCCTGTCGGA GGCAGCCCTC 
AGCGAGAGCC TGGAGATTTC GCGCAATACC TTGCGTGAGG TTTTTCGCAT CCTCACCAAG 
GAAGGCTTGG TGCGGCATGC GCCGAACCGC GGCGTGTCGG TGGCGATTCC CAGCATCGCC 
TCCATCATCG ACATTTACCG TGTGCGCCGC CTGATCGAGT GCCAGGCTCT GGCGCAGGCC 
TACCCGCGCC ATCCGGCCAA AAAGCACATG CGCGAGGCCG TCGAGATGGC GCTCAAGTGC 
CGCGACGCCG GAGACTGGCA GGGCGTGGGG ACCGCGAACA TGGAGTTTCA CATGGCCATC 
GTCGAGCTGG CCGACAGCGA GCGGCTGAAC GTCATGTTCT CGCACCTGCT GGCCGAGCTG 
CGGCTGGCTT TCGGCCTGCT CAAGGACCCG GAATTTCTGC ACGCGCCGTA TGTCGAGAGC 
AACGTGAAGA TTCTCGAGTT GTTCGAGGCG GGCAAGCTGC AGGAGAGCGC CACTACGCTC 
AACGAATATC TGGTGCACTC CGAGCGCATT GTTCTGGCTG TTTATGCCCG GCACCTCTCC 
GACACAGGAA GCTTCGAGTA A 

 

Protein sequence

MTQKLPANTL TLNERTADLI RQKIVKGEFS PGQRLSEAAL SESLEISRNT LREVFRILTK 
EGLVRHAPNR GVSVAIPSIA SIIDIYRVRR LIECQALAQA YPRHPAKKHM REAVEMALKC 
RDAGDWQGVG TANMEFHMAI VELADSERLN VMFSHLLAEL RLAFGLLKDP EFLHAPYVES 
NVKILELFEA GKLQESATTL NEYLVHSERI VLAVYARHLS DTGSFE