| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0685 |
|---|
| Symbol | |
|---|
| ID | 3963831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 720615 |
|---|
| End bp | 722591 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637915516 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_521967 |
|---|
| Protein GI | 89899496 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA CGTTGAAACT TCCCCGCCTT GACATCCAGG CCCTTCGCGG GCTCGCGGTG
CTGATGGTGG TGCTGTATCA CACAAAGATT GGCATGCTGG AATCGGGCTA CCTGGGTGTT
GACGTTTTCT TTGTCATATC TGGCTTCCTC ATCACAACGC TGGTTGCCAA CGGGATTCAT
CGCAAGACGT TTCGCTTGTC TGAGTTCTAT TTCAGGCGAG CCAAGCGTCT ATTGCCTGCG
GCCTACGTCG CCTTTCTTGT TACGGCGCTC TGTGCGCCCT GGTTTCTTAA CCAGCAGGAG
TTGCGAGATT TTGCAACCCA AGTAGCGGGT GCTATGACAT TCACAGGCAA CATCGTGCTC
TGGCAGCAAA CCGGCTACTT CGAAGGGGCT GGTGATTTAA AGCCACTGCT GCATGTTTGG
TCGCTCTCAA TTGAAGAACA ATACTATTTT TTGCTCCCTG CCACGTTGTT GCTCACGCGG
CCAAAGCGCT GGCTCTGGGG GGCGATAGCC ATCGTGCTAA TCAGCCTTGG CCTATGCGTT
GTAGGAGGTA TTTTTAAGCC CATTGCAACC TTCTATTTGC TACCAACACG CGCCTGGGAA
CTGTTGATTG GCTCAGTTGG AGCATTGTGG TTGCTACGCC CGCAAGATGA CCAACATCGA
ATCATCAACA GGCTGGTGCG TTTGCTATTT GTGCCATCGG TGCTGTGCCT GCTGGTCCTG
CCTTTTCTAC CCTCTGTGGG CGTGCATCCT GGTCTTAATG CATTGCTCGT CTGCGTGGCA
ACGCTTGTTG TTATTTTGCG AAATAGCCAA GAACTCAATA CGGCATGGCC CACCCGCTTA
ATGGCGCGCA TCGGCGACTT TTCGTATTCA CTGTACCTGG TGCATTGGCC CATCATTGCC
TTCATGAAAA ATGCCTGGCT TGGCAACAAC CCCGAGCTGC CACTTCAACT GCGGTTGTTG
ACCCTGGTGC TGTCATTTGG TCTTGCCTAC ACACTCTATC GTCTGGTGGA AGACCCCATT
AGAAAGCAAA ATTTCGAATT CTCAGCGCCA CTCATCGCGG GGGTAACTCT TTCATCCGCA
CTGCTCATTG CAATGACGCC GTTCTATATC CTCCAAACCA AGTCTGAGCA GATCACCTTG
GGTGATGCCC GTGCAATTAA CCCGGGGTTC TCAGTGAGCT GTGATTACGA AGCCACTTTT
ACCCCGAAAA GCGAATGCAA AAACAAAAAA AATCCGGGCT TACTTGTTTG GGGGGACTCC
TACGCAATGC ACTTGATACC TGGCTTGGTT CAACAATGGA GCAATGGAGT GATGCAGGCC
ACCATGAGTG GCTGTGGACC CTTTCTTGGG CTAGCGCCAC GCAGAAAAAT CAATGGGGAA
CTTGATAGTC GAGATCAAGC ATGGGCAGAG CGATGCATTG GTTTTAACCA ATCAGTTATT
GATTTTCTGC GCACGTCTCC TTCTATTACA ACCGTAGTTC TGTCAAGTCC ATTTGCCGCC
TACTTTGATA CAGCTTATGA ACATGTTTTT CTGGATGGAA AGTCATTTGT TTCGCGACCT
GTTGACACCT CTTCGGCAAT AGCAGGTCTA CGCGCCACGG TCGAAAATTT GCGGGTGATT
GGGAAGAAAG TGGTGCTGAT AGCCCCGCCG CCCTCATCGG GATTCGACAT TGGCGCCTGC
TTGGAGCGGC AGCTGAGCGG AAAAGTGATT CTTGGCAGAC TCAATGGTTG CGTGATAGAC
AAAGCCGAAT ATCAATTCAA GCGCGCTGAC GTGCTTATTT TTTTGAACGC AATAACGTCT
GCCGCTGACC TGTCAGTAAT TCGCTTTGAT CCATGGCTAT GCAAAGAACG CACCTGCGAC
ACACTGCTGG ACGGCACGAT GATTTATCGC GACGCAGGAC ATCTGTCAGT AGCGGGATCG
AAAATGCTGG CTGATCGCAT GCAGTTGGGC AAACTAATTC GCGAGCAAGC GAAATGA
|
|---|
| Protein sequence | MSDTLKLPRL DIQALRGLAV LMVVLYHTKI GMLESGYLGV DVFFVISGFL ITTLVANGIH
RKTFRLSEFY FRRAKRLLPA AYVAFLVTAL CAPWFLNQQE LRDFATQVAG AMTFTGNIVL
WQQTGYFEGA GDLKPLLHVW SLSIEEQYYF LLPATLLLTR PKRWLWGAIA IVLISLGLCV
VGGIFKPIAT FYLLPTRAWE LLIGSVGALW LLRPQDDQHR IINRLVRLLF VPSVLCLLVL
PFLPSVGVHP GLNALLVCVA TLVVILRNSQ ELNTAWPTRL MARIGDFSYS LYLVHWPIIA
FMKNAWLGNN PELPLQLRLL TLVLSFGLAY TLYRLVEDPI RKQNFEFSAP LIAGVTLSSA
LLIAMTPFYI LQTKSEQITL GDARAINPGF SVSCDYEATF TPKSECKNKK NPGLLVWGDS
YAMHLIPGLV QQWSNGVMQA TMSGCGPFLG LAPRRKINGE LDSRDQAWAE RCIGFNQSVI
DFLRTSPSIT TVVLSSPFAA YFDTAYEHVF LDGKSFVSRP VDTSSAIAGL RATVENLRVI
GKKVVLIAPP PSSGFDIGAC LERQLSGKVI LGRLNGCVID KAEYQFKRAD VLIFLNAITS
AADLSVIRFD PWLCKERTCD TLLDGTMIYR DAGHLSVAGS KMLADRMQLG KLIREQAK
|
|---|
| |