Gene Rfer_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0591 
Symbol 
ID3960109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp615614 
End bp617008 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content62% 
IMG OID637915421 
ProductGntR family transcriptional regulator 
Protein accessionYP_521873 
Protein GI89899402 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCCC TTAATCCGCA GAGTGCGACG CCCCTGGTCC TGCAAATCGT GGACGGGTTC 
CGGCTCGCCA TCCAGGACGG CTCGCTGCGC CCAGGCTCCA AGGCGCCGTC GATCAGGCAG
TTTGCCCACG CGCACGGGGT CAGCGTGTTT ACCGTGGTCG ATGCCTACGA CCGGCTGGTA
GCCCAGGGCT ACTTCACGTC GCGCCCCCAT TCCGGTTTTT TTGTCAGACA GCGTCCGGTG
TCGAACATCG AGGTGCCCGG ACACGGTCCG AATTTCAACT TCGACTCCAT GTGGTACCTG
CGCCGCATTT TTGAAAACCG GGCACTGCGC ATCAAGCCAG GCTGCGGCTG GTTGCCCGGT
GACTGGCTGT TTCAGGACGG TGTGCGCCGC AGCCTGCGCA GTTTGGCCAC CGACGACGTG
GACTTGGGTG GCTATGGTGA GCCCAAGGGC TACCCACCGC TGCGCCAACT GGTGCGCGAC
CTGCTGGCCG AGCAGGAAAT TGCCGTGAGT TCGGAGCAGG TGCTGCTCAC CCAAGGATCG
AGCCAGGCCA TGGACCTCGT GGCCCGGCGC CTGGTGCGCC CGGGAGACGC GGTGCTGGTG
GACGAGCCGG GTTACCCCAA TCTGCTGTTT TCCTTGCGCT TTTTGGGCGC ACGCCTGATC
GGCGTGCCGC GCACGCCAGT TGGCTACGAC CTGGTGACGC TGGAACGTCT GGTCATCAAA
CACCAGCCCA AGCTGTTTTT TACCCAGCCC CGGCTGCAGA GCCCAACCGG GTCGGTCGCC
CAGTTGGCGC ATCTGCACCG CGTCATGCAG CTGGCCGACA AATACGATTT TCTGGTGGTG
GAGAACGACA TTTACGCCGA CCTCGACCCG GAGCCCCGGC CCTCGCTGGC CAGCCTGGAC
CAGCTCAACC GGGTGATTTA CATCAGCAGT TTTTCCAAAA CGATTTCGCC CAATATCCGG
GTCGGCTACC TGGCGGCCAA TCCGGATCTG CTGGAAGACC TGGCCCAGCT CAAGATGATC
TCAGGCTTGA CGTCTTCGGA GTTCAGTGAG CGTCTGGCGT ATGGCGCCTT GATGGATGGG
CGCTGGCGCA AGCACGTCAA GAACCTGCGC GAGCGCCTGG CAAAAGCGCA CGAGGGCGCG
GCATCGCGTT TGCTGAAAAT CGGCTTTGAA ATATTTTGCG AACCCAAGGC CGGCATTTTC
CTGTGGGCCA AACACCCGGC CATTGCGGAT TCGGCAGAGC TGGCCTACAA AGCCACCGAG
CAGGACATTT TGCTCGGGCC GGGGCATTTG TTCAGCCCTG ATTTACAGCC CAGTCCATGG
CTGCGCTTCA ATGTTATTTT TTGCGATGAA CCGGCTCTGT TCACCTTCCT GGAACAGCAG
TGCCGGGCGC TCTGA
 
Protein sequence
MFSLNPQSAT PLVLQIVDGF RLAIQDGSLR PGSKAPSIRQ FAHAHGVSVF TVVDAYDRLV 
AQGYFTSRPH SGFFVRQRPV SNIEVPGHGP NFNFDSMWYL RRIFENRALR IKPGCGWLPG
DWLFQDGVRR SLRSLATDDV DLGGYGEPKG YPPLRQLVRD LLAEQEIAVS SEQVLLTQGS
SQAMDLVARR LVRPGDAVLV DEPGYPNLLF SLRFLGARLI GVPRTPVGYD LVTLERLVIK
HQPKLFFTQP RLQSPTGSVA QLAHLHRVMQ LADKYDFLVV ENDIYADLDP EPRPSLASLD
QLNRVIYISS FSKTISPNIR VGYLAANPDL LEDLAQLKMI SGLTSSEFSE RLAYGALMDG
RWRKHVKNLR ERLAKAHEGA ASRLLKIGFE IFCEPKAGIF LWAKHPAIAD SAELAYKATE
QDILLGPGHL FSPDLQPSPW LRFNVIFCDE PALFTFLEQQ CRAL