Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0591 |
Symbol | |
ID | 3960109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 615614 |
End bp | 617008 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915421 |
Product | GntR family transcriptional regulator |
Protein accession | YP_521873 |
Protein GI | 89899402 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCCC TTAATCCGCA GAGTGCGACG CCCCTGGTCC TGCAAATCGT GGACGGGTTC CGGCTCGCCA TCCAGGACGG CTCGCTGCGC CCAGGCTCCA AGGCGCCGTC GATCAGGCAG TTTGCCCACG CGCACGGGGT CAGCGTGTTT ACCGTGGTCG ATGCCTACGA CCGGCTGGTA GCCCAGGGCT ACTTCACGTC GCGCCCCCAT TCCGGTTTTT TTGTCAGACA GCGTCCGGTG TCGAACATCG AGGTGCCCGG ACACGGTCCG AATTTCAACT TCGACTCCAT GTGGTACCTG CGCCGCATTT TTGAAAACCG GGCACTGCGC ATCAAGCCAG GCTGCGGCTG GTTGCCCGGT GACTGGCTGT TTCAGGACGG TGTGCGCCGC AGCCTGCGCA GTTTGGCCAC CGACGACGTG GACTTGGGTG GCTATGGTGA GCCCAAGGGC TACCCACCGC TGCGCCAACT GGTGCGCGAC CTGCTGGCCG AGCAGGAAAT TGCCGTGAGT TCGGAGCAGG TGCTGCTCAC CCAAGGATCG AGCCAGGCCA TGGACCTCGT GGCCCGGCGC CTGGTGCGCC CGGGAGACGC GGTGCTGGTG GACGAGCCGG GTTACCCCAA TCTGCTGTTT TCCTTGCGCT TTTTGGGCGC ACGCCTGATC GGCGTGCCGC GCACGCCAGT TGGCTACGAC CTGGTGACGC TGGAACGTCT GGTCATCAAA CACCAGCCCA AGCTGTTTTT TACCCAGCCC CGGCTGCAGA GCCCAACCGG GTCGGTCGCC CAGTTGGCGC ATCTGCACCG CGTCATGCAG CTGGCCGACA AATACGATTT TCTGGTGGTG GAGAACGACA TTTACGCCGA CCTCGACCCG GAGCCCCGGC CCTCGCTGGC CAGCCTGGAC CAGCTCAACC GGGTGATTTA CATCAGCAGT TTTTCCAAAA CGATTTCGCC CAATATCCGG GTCGGCTACC TGGCGGCCAA TCCGGATCTG CTGGAAGACC TGGCCCAGCT CAAGATGATC TCAGGCTTGA CGTCTTCGGA GTTCAGTGAG CGTCTGGCGT ATGGCGCCTT GATGGATGGG CGCTGGCGCA AGCACGTCAA GAACCTGCGC GAGCGCCTGG CAAAAGCGCA CGAGGGCGCG GCATCGCGTT TGCTGAAAAT CGGCTTTGAA ATATTTTGCG AACCCAAGGC CGGCATTTTC CTGTGGGCCA AACACCCGGC CATTGCGGAT TCGGCAGAGC TGGCCTACAA AGCCACCGAG CAGGACATTT TGCTCGGGCC GGGGCATTTG TTCAGCCCTG ATTTACAGCC CAGTCCATGG CTGCGCTTCA ATGTTATTTT TTGCGATGAA CCGGCTCTGT TCACCTTCCT GGAACAGCAG TGCCGGGCGC TCTGA
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Protein sequence | MFSLNPQSAT PLVLQIVDGF RLAIQDGSLR PGSKAPSIRQ FAHAHGVSVF TVVDAYDRLV AQGYFTSRPH SGFFVRQRPV SNIEVPGHGP NFNFDSMWYL RRIFENRALR IKPGCGWLPG DWLFQDGVRR SLRSLATDDV DLGGYGEPKG YPPLRQLVRD LLAEQEIAVS SEQVLLTQGS SQAMDLVARR LVRPGDAVLV DEPGYPNLLF SLRFLGARLI GVPRTPVGYD LVTLERLVIK HQPKLFFTQP RLQSPTGSVA QLAHLHRVMQ LADKYDFLVV ENDIYADLDP EPRPSLASLD QLNRVIYISS FSKTISPNIR VGYLAANPDL LEDLAQLKMI SGLTSSEFSE RLAYGALMDG RWRKHVKNLR ERLAKAHEGA ASRLLKIGFE IFCEPKAGIF LWAKHPAIAD SAELAYKATE QDILLGPGHL FSPDLQPSPW LRFNVIFCDE PALFTFLEQQ CRAL
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