| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0544 |
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| Symbol | |
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| ID | 3960732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 567813 |
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| End bp | 569048 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637915374 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_521826 |
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| Protein GI | 89899355 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTT ATTCTTTTGA AGCTCTGACC GCCGACGGCG AAACCCGCAA GGGTGTGATC
GAGGCCGACT CGGCCAAGGG CGCGCGCAGC CTGCTGCGCG GCCAGGCCAT GGTGCCGATC
AAGGTGGAGT CGGTCGGGGC GCAGGCGGCG GGGCAGGACG GGGCCGGTGG CGCCGGCGCA
GGCCGCAGTC TGAGGCGGCG GGTTTTCAGC GCCACGGGAC TGGCCATCTG GACGCGCCAA
CTGGCCGGCC TGGTGTCCTC GGGCCTGCCG CTGGAGCGGG CGCTGACCTC GCTGTCGGAT
GAGGCCGAGC GCGACAATGA GCACCACCTG GTGGCGCTGT TGCGCGCTGA AGTCAACGGC
GGCGCGACCT TTGCCAAGGC CTTGTCGCAG CATCCGCGTG AGTTCACCCC CATTTTTATT
GCCGTTATCG GCGCCGGTGA GCAAAGCGGC AACCTCGGCC TGGTGCTGGA GCGCCTGGCC
GACGACCTGG AAGAGCAGCA GGCGCTCAAG GCGAAGCTGA TAGGCGCGGC GCTGTACCCG
GCCATCGTGT CGCTGGTGGC GGTTGTCATT GTGCTGTTCT TGGTGACCTA TGTGGTGCCG
CAGGTGGCCC ATGTGTTTGC GGGCAGCAAG CGCGCCCTGC CGCTGCTGAC GGTGATCATG
ATCGGCACCA GCGCCTTTGT GCGCAGTTAT GGCTGGCTGA TGCTGGTTGC TATTATTTTC
GGAGTTATCG GCGCACGCCT GGCGCTGGCT AACGCCTTGT TTCGTGAAAA ATTTGACGCC
GCCTGGTTGA ATCTGCCGAT TCTGGGCAAG CTCTCACGCA GTTACAACAC CGCGCGCTTT
GCCAGCACGC TGGCGATGCT GGCCGCCGCC GGGGTGCCGA TTCTCAAAGC CCTGCAGGCG
GCCGCTGAAA CGCTCTCCAA CCGCGCCATG CGCACCGACG CGCTCGATGC CTTGGTGCTG
GTGCGCGAAG GTGCGCCGCT GGCCTCGGCG CTGGCGCAAA AAAAGCGTTT TCCGGGGCTG
CTGGCCATGT TCGCCCGCCT GGGTGAGCAA ACCGGCCAGT TGCCCACCAT GCTGCAGCGC
GCGGCCAAGC AACTCAGTGT CGAGGTGCAG CGCCGCGCCA TGCAACTGGC CACCATTCTG
GAGCCGCTGC TGATTGTGGT CATGGGCGTG GTGGTGATGT TGATCGTGCT GGCGGTGCTG
ATGCCGATCA TTCAACTCAA TCAACTGGTG AAATGA
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| Protein sequence | MPVYSFEALT ADGETRKGVI EADSAKGARS LLRGQAMVPI KVESVGAQAA GQDGAGGAGA
GRSLRRRVFS ATGLAIWTRQ LAGLVSSGLP LERALTSLSD EAERDNEHHL VALLRAEVNG
GATFAKALSQ HPREFTPIFI AVIGAGEQSG NLGLVLERLA DDLEEQQALK AKLIGAALYP
AIVSLVAVVI VLFLVTYVVP QVAHVFAGSK RALPLLTVIM IGTSAFVRSY GWLMLVAIIF
GVIGARLALA NALFREKFDA AWLNLPILGK LSRSYNTARF ASTLAMLAAA GVPILKALQA
AAETLSNRAM RTDALDALVL VREGAPLASA LAQKKRFPGL LAMFARLGEQ TGQLPTMLQR
AAKQLSVEVQ RRAMQLATIL EPLLIVVMGV VVMLIVLAVL MPIIQLNQLV K
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