Gene Rfer_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0520 
Symbol 
ID3963820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp544383 
End bp544946 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID637915351 
Producthypothetical protein 
Protein accessionYP_521803 
Protein GI89899332 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAT TTTTAGTTTC AACCGGTATC GTGGCCTTGG CCGAAATGGG TGACAAAACC 
CAACTACTCG CACTTCTGCT GGCGGTGCGC TTTCGCCGGC CCTGGCCGAT TGTGCTGGGC 
ATCTTTGTCG CCACCCTAGC CAACCACGCC CTGGCAGGGG CTGTGGGGGC CTGGGTGACC 
ACCGTGCTGG GACCGGATGT GCTGCGCTGG GTGCTGGGCG GCTCGTTCAT CGCCATGGCG 
GTCTGGATGC TGATTCCCGA CAAGATGGAC GACGACGAAA CGGGCGCGGC GCCCCGGTTT 
GGTGTCTTTG GCACCACCGT CATCGCCTTT TTCCTGGCCG AGATGGGGGA TAAAACCCAA 
GTTGCCACCG TCATGCTGGC GGCGCAATAC CACGCTTATT TTTCAGTCAT AGCCGGTACC 
ACGCTGGGCA TGATGCTGGC CAATGCGCCG GTGGTCTGGC TGGGTGAACG CATGACACGA 
CTGCTGCCGC TGCGCGCGGT GCACATCGTG TCTGCCTTGA TCTTCCTGGG GCTGGGGCTG 
GCGGCCTTGC TGGGGTGGAT TTAA
 
Protein sequence
MDAFLVSTGI VALAEMGDKT QLLALLLAVR FRRPWPIVLG IFVATLANHA LAGAVGAWVT 
TVLGPDVLRW VLGGSFIAMA VWMLIPDKMD DDETGAAPRF GVFGTTVIAF FLAEMGDKTQ 
VATVMLAAQY HAYFSVIAGT TLGMMLANAP VVWLGERMTR LLPLRAVHIV SALIFLGLGL 
AALLGWI