Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0519 |
Symbol | |
ID | 3963819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 542970 |
End bp | 544172 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637915350 |
Product | Rh-like protein/ammonium transporter |
Protein accession | YP_521802 |
Protein GI | 89899331 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAC TCAAACAGGG CGCCGACACC TTGTTCATCT TGCTCGGCGC CGTCATGGTG CTGGCCATGC ATGCAGGTTT TGCATTTCTG GAGCTCGGCA CGGTCCGCCG CAAGAATCAG GTCAATGCGC TGGTCAAGAT CCTGGTGGAC TTTTCGGTCT CGACCATCGC GTACTTTCTG GTGGGTTATG GCGTCGCCTA TGGCACTCAT TTTTTTGTCG GCGCCGAGCA GTTGGCCGCC AAGAACGGTT TCGAGCTGGT CAGGTTCTTT TTCTTGCTGA CGTTTGCCGC CGCCATTCCG GCCATTATTT CGGGCGGCAT TGCCGAGCGC GCCCGCTTCT GGCCGCAACT GATCGCCACG GCGGTCATCG TCGGCTTTGT CTACCCATTT TTTGAGGGCA TTGCCTGGAA CCAGCATTTT GGCGTGCAGG GCTGGATCAA AAGCCTGACC GGCGCCGAGT TTCATGACTT TGCCGGCAGC GTGGTGGTGC ACGCGGTGGG CGGCTGGGTT GCGCTGCCCG CCGTGATCTT GTTGGGCGCG CGCGCCAACC GCTACCGCAA GGACGGCGGC ATTTCGGCCC ATCCACCATC GAGCATTCCG TTTCTGGCGC TGGGTGCCTG GGTGCTGACG GTCGGCTGGT TTGGCTTTAA CGTGATGAGC GCACAAACGC TGGACAAGAT CTCGGGGCTG GTGGCGGTCA ACTCGCTGAT GGCGATGGTG GGCGGCACGC TGGCGGCGCT GGTGGCAGGC AAGAATGACC CTGGCTTTGT GCACAACGGA CCCCTGGCAG GGCTGGTCGC CGTGTGCGCT GGCTCCGATC TGATGCACCC ATTAGGTGCA CTGGTGGTGG GTGTGGTGGC CGGTGCTCTG TTTGTGCGCA TGTTCACCCT GACGCAAAAC AGATGGAAGA TTGACGACGT GCTGGGCGTG TGGCCACTAC ATGGCCTGTG CGGCACCTGG GGCGGCATTG CCGCCGGTAT TTTTGGCAGC CAAGCGCTCG GCGGCCTGGG GGGCGTGAAT CTGGGCGCCC AACTGATCGG CACCGCCATG GGTGTGGCCT GGGCCGTGGC GGGTGGTCTG CTGGTTTATG GCGGACTCAA AGCCGTCATG GGCTTGCGCC TGAGCCAGGA GGAAGAATAC AACGGCGCCG ACCTGTCCAT TCACATGATC AGCGCCACGG CCGAGCGCGA GGTCAACTGG TGA
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Protein sequence | MEALKQGADT LFILLGAVMV LAMHAGFAFL ELGTVRRKNQ VNALVKILVD FSVSTIAYFL VGYGVAYGTH FFVGAEQLAA KNGFELVRFF FLLTFAAAIP AIISGGIAER ARFWPQLIAT AVIVGFVYPF FEGIAWNQHF GVQGWIKSLT GAEFHDFAGS VVVHAVGGWV ALPAVILLGA RANRYRKDGG ISAHPPSSIP FLALGAWVLT VGWFGFNVMS AQTLDKISGL VAVNSLMAMV GGTLAALVAG KNDPGFVHNG PLAGLVAVCA GSDLMHPLGA LVVGVVAGAL FVRMFTLTQN RWKIDDVLGV WPLHGLCGTW GGIAAGIFGS QALGGLGGVN LGAQLIGTAM GVAWAVAGGL LVYGGLKAVM GLRLSQEEEY NGADLSIHMI SATAEREVNW
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