| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0496 |
|---|
| Symbol | |
|---|
| ID | 3964087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 514998 |
|---|
| End bp | 515954 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637915327 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_521779 |
|---|
| Protein GI | 89899308 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.920568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CCGAACTTGC CGATGACCCC GAGGACACAG ACCACAGCCC GGCCGAGCGC
ATCGCCGCTG CTTCGCGCAG CACCTGGGTC AGCGTGGTTG TCAACCTTGT CCTGACCATC
ACCCAGATCG CGATCGGTGT CGTGGCCAAG TCGCAAGGCC TGATTGCCGA CGGCATTCAT
TCGCTGTCGG ACCTGGTGGC GGACTTTGTC GTGCTGTTCG CCAGCCACCA CAGTAAAAAA
GACGCTGACG CTGACCACCC CTACGGCCAC CAGCGTTTTG AGACCGCAGC CTCACTGGTG
CTGGGCACGC TGTTGCTGGC CGTCGGCCTG GGCATGTTGT GGTCGGCCGC GCGCAAGCTG
GAAGCGCCCG AGACCGTGCA GACCGTCCAC ATCATGGCCC TGTGGGTGGC CGGCGGCGCG
CTGATCGCCA AGGAGCTGTT GTTCCGCTAC ATGCTGTCGG TGGCCAAGCG CGTCAAGTCG
AGCATGCTGG TGGCCAACGC CTGGCATGCG CGCTCGGATG CGGCGTCCTC GCTGGTGGTG
GGCATCGGCA TCGTCGGCAA TCTGGCAGGC TACCCGATCC TGGATCCGAT CGCCGCGCTC
ATCGTCGGCT TCATGGTCAC CAAGATGGGC TGGGGCTTCA GCTGGGACGC GCTGCACGAC
CTGATGGACC GCGCGGTGGA CGAGCAGGAG GTGCAGGCCA TCCGCCTGAC GCTGATCGAA
ACTCCGGGCG TGAGCGGCGT GCACGACGTG CGCACGCGCA AGATGGGCGA CATGATCGTG
GTGGACGCGC ACATCGAAGT CGATGCCGCG ATCAGCGTCG AGGCCGGCCA TGACATTGCC
GTCGAGGCCA GGCAGCGTGT GCTGCAGCGC CATCGGGTGC TGAACCTGAT GACGCATGTG
GACCCTTGGC GCCGGCCTGA TCTGGACCAC CCGACGCCTG CAGCAGCGCC ACGCTGA
|
|---|
| Protein sequence | MKFTELADDP EDTDHSPAER IAAASRSTWV SVVVNLVLTI TQIAIGVVAK SQGLIADGIH
SLSDLVADFV VLFASHHSKK DADADHPYGH QRFETAASLV LGTLLLAVGL GMLWSAARKL
EAPETVQTVH IMALWVAGGA LIAKELLFRY MLSVAKRVKS SMLVANAWHA RSDAASSLVV
GIGIVGNLAG YPILDPIAAL IVGFMVTKMG WGFSWDALHD LMDRAVDEQE VQAIRLTLIE
TPGVSGVHDV RTRKMGDMIV VDAHIEVDAA ISVEAGHDIA VEARQRVLQR HRVLNLMTHV
DPWRRPDLDH PTPAAAPR
|
|---|
| |