| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0483 |
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| Symbol | |
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| ID | 3963802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 500120 |
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| End bp | 501019 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637915314 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_521766 |
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| Protein GI | 89899295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCT TGGTCCGATG CCGCCGTCCG CTGTTGATCG CCCTTTTGGG TCTCGCCCTT
GCCTTGCCGG TGCTGGCCCA AAACAGCACC CCGGATGCCC GCGCTATCGA CTTGCGCCAG
CAGGCCATCG CCTACGAGAA CGGTGAAGGT GTGCCGCGCA ACCCAGCGCT GGCGATTTCC
CTGTACTGCC AGGCCGCTGC TCTGGGCGAC GCCCAAGCCC ACTACAGCCT GGGCTGGATC
TACGCCAACG GGCGCGGCGT GCCACGCGAC GACGCTATGG CGGCCTACTT TTTCCAGGCC
GCTGCCGCGC AGGGGCTGGA AGCCGCCCAA CGGATGCTGA AAATCGTGGG GGAACCGACC
CCCGACGTGC CCGAGTGCCT GCGTCCGCCG GCGCCGCCGC CAGCGTCGGC GACCGACCTG
GTGCCGGAGC CGGGTGTGGA CTACCAAGCG ATTGCGCCGC GCAAGATTTT TGAGCTGGTG
ATGAAAATGG CGCCCCAGTA CCAGGTGCAG CCGCAACTGG CGCTGGCCAT CATCGCCGCC
GAATCGAATT TCGACAGCCA GGCGCTGTCG CCCATGAACG CCCAGGGCCT GATGCAGCTG
ATCCCCGAGA CCAGCCAGCG CTTTCAGGTG CGCAACCCGT TTGACGCGGC GCAGAACATC
CGCGGTGGCC TGGCCTACCT GCGCTGGTTG CTGGCCTATT TTGAGGGCGA CATTGTCTTG
GTGGCCGCCG CCTACAACGC GGGCGAGGGC AAGGTGGAGC GTTACCGTGG CGTGCCGCCG
TACCAGGAAA CCCGCGCCTA CGTGCAGCGC ATCGTGCGCG CGGTGGGCAC GCTGGCGCAC
CCGTTTGACG CCCGCGTGAC CCCGCCCTCG CCCGCGCTGG CCCTGATCCG GCTTAACTGA
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| Protein sequence | MHALVRCRRP LLIALLGLAL ALPVLAQNST PDARAIDLRQ QAIAYENGEG VPRNPALAIS
LYCQAAALGD AQAHYSLGWI YANGRGVPRD DAMAAYFFQA AAAQGLEAAQ RMLKIVGEPT
PDVPECLRPP APPPASATDL VPEPGVDYQA IAPRKIFELV MKMAPQYQVQ PQLALAIIAA
ESNFDSQALS PMNAQGLMQL IPETSQRFQV RNPFDAAQNI RGGLAYLRWL LAYFEGDIVL
VAAAYNAGEG KVERYRGVPP YQETRAYVQR IVRAVGTLAH PFDARVTPPS PALALIRLN
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