Gene Rfer_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0449 
Symbol 
ID3963416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp455152 
End bp455646 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID637915280 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_521732 
Protein GI89899261 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.471261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATTTTCTCCG ACTGGAGCGG TGGACCAGCG GACTGTCGTT GTACACCGCC 
TGTGCCATGC TGATGCTGGC GGCCAGTCTG GCCATGTTCC AGATCGTCAC CCGCTTCGTG 
CTTGAAATAC CCGCTGAATG GACAGAAGTG CTGATTCGTT TCAGCCTGAT CTGGATGGTG 
TTTCTGGGTA TTCCAACGGC GTTTCGCCAG GGTGCCATGG TCAGTGTGGA CGTGCTTTAC 
CGCTGGAGCC CGCCACGCAT ACGCCGTTTG CTCGACTGGA TCGTGTGCCT CGCCGCTGCC 
GGGTTGATTT GCATCATCAT CTGGTGGGGC TGGGACTATG CCGTGCGTGG CAGGGTGCAA 
TCCATGGCCG GACTGGAAAG CCTGTCGATG TTCTGGGCCT ACCTCGCCAT GCCGGTGGGG 
GGCGTGTTCA GCCTGATCGG CATCTTCGGT AATCTGCTGG ACACCCAGCG TCTTGAATTG 
GAGACCGCAG TATGA
 
Protein sequence
MKENFLRLER WTSGLSLYTA CAMLMLAASL AMFQIVTRFV LEIPAEWTEV LIRFSLIWMV 
FLGIPTAFRQ GAMVSVDVLY RWSPPRIRRL LDWIVCLAAA GLICIIIWWG WDYAVRGRVQ 
SMAGLESLSM FWAYLAMPVG GVFSLIGIFG NLLDTQRLEL ETAV