Gene Rfer_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0441 
Symbol 
ID3962853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp447187 
End bp448128 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID637915272 
ProductLysR family transcriptional regulator 
Protein accessionYP_521724 
Protein GI89899253 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAC CCGCATCCGC ACCTTCTGAA ATGGCCTTCT TCAGCCTGTT GGTGCGCAGC 
GGCAGCTTCT CTGCCGCTGC GCGCGAGCTG GATATCACAA CCCCGGCGGT GAGCAAGCGG
CTGGCCCAGA TGGAGGCCCG ACTGGGTGTG CAGTTGCTGA ATCGCACGAC GCGTCGTATT
GGTCTCACGC CCGAAGGTGA GGTTTACCTG GAGCACGCGC GGCGCATCCT CGCCGATATT
GGGGACATGG AGCAGCTGGT ATCCAACTCG GTTGCCGCCC CCAAAGGCTT GTTACGTGTG
AACGCCACCT TGGGCTTTGG CCGCAGCCAT ATCGCGCCGC TGATTTCTGA TTTTGCCAAA
CGCTATCCAG AAGTGCAGAT CCAACTGCAG CTCACTGTCA ATCCGCCGTC GCTGACAGAG
GATGCCTTTG ATGTCTGCAT CCGCTTTGGT GAGCCACCCG ATGCACGAAT GATCGCGCGG
CGCATAGCTT CTAACCGGCG CCTGATCTGC GCAGCACCCG CCTACCTGAC CCGGCAGGGT
ACACCCCAGG TACCGAACGA CCTGGCGCAG CACAACTGCA TTTGCATTCG TCAAGGTGAG
GAAGCCTATG GCATCTGGCA CCTGAGGTCA GGCCAGCGCT CCGAGACGGT CAAAGTGCGT
GGAACGTTGA GCACCAACGA TGGCGAAATT GCGGTCAACT GGGCGCTTGC AGGTCATGGC
CTCATCATGC GGGCGGAATG GGATATAGCA AAATATTTGG CCAGTGGGCG GCTCCGCCAG
GTGCTGGCGA ACTGGCAGAC GCCGGGAGCC GATATTCACG CTGTCTACCC GCAAAGCCTG
CAGACTGCGG CGCGAGTGCG CGCCTTCGTG GACTTCGTGG TAAACGCTTT TTCTGCCTCG
AACCCACTGG GACAGGTTCT TCAAGAAGAG ATTTCCTCCT GA
 
Protein sequence
MPTPASAPSE MAFFSLLVRS GSFSAAAREL DITTPAVSKR LAQMEARLGV QLLNRTTRRI 
GLTPEGEVYL EHARRILADI GDMEQLVSNS VAAPKGLLRV NATLGFGRSH IAPLISDFAK
RYPEVQIQLQ LTVNPPSLTE DAFDVCIRFG EPPDARMIAR RIASNRRLIC AAPAYLTRQG
TPQVPNDLAQ HNCICIRQGE EAYGIWHLRS GQRSETVKVR GTLSTNDGEI AVNWALAGHG
LIMRAEWDIA KYLASGRLRQ VLANWQTPGA DIHAVYPQSL QTAARVRAFV DFVVNAFSAS
NPLGQVLQEE ISS