| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0422 |
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| Symbol | |
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| ID | 3962796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 430626 |
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| End bp | 431309 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637915255 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_521707 |
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| Protein GI | 89899236 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTC TCATCGTCGA AGACGAACCA AAAACGGGCG ACTACCTCAA ACAAGGTTTG
GGCGAGGCTG GCTTTGTGGT GGATTTGCTG CGAGATGGCA CCGACGGCCT GCATCACGCG
CTCACAGAAG ACTACGATCT GGCGATTCTC GATGTGATGC TGCCTGGCAT GGACGGTTGG
GCGGTTCTGG CCGGTATCCG CAAAGCGGGC AAGGACATGC CGGTGCTGTT TCTGAGCGCG
CGCGACCATG TTGATGACCG CGTCAAGGGC CTGGAGCTGG GCGCGGACGA CTACCTGGTC
AAACCATTTG CCTTTTCTGA ATTACTGGCC CGCGTGCGCA CGCTCTTGCG CCGGGGCGGC
AAAGGTTCGT CCACGGAGTT TTTGCGCGCT GCCGACCTGG AGCTTGACTT GCTGCGCCGC
CGGGTCACCC GCGCCGGCAA ACGCATTGAT CTGACTTCCA AAGAATTTGC CCTGCTGGAG
TTGTTGCTGC GCCGCCAGGA CGAAGTGCTG CCTCGCTCAC TGATCGCGTC CCAGGTGTGG
GACATGAATT TCGATTCCGA CACCAATGTG ATCGAGGTTG CCATGCGACG CCTGCGCGCC
AAGGTGGACG ACAATTTTGA ACCCAAACTG ATTCGTACCG TGCGCGGCAT GGGCTACGTG
CTGGAGAGTC CCGCTTGCGC TTGA
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| Protein sequence | MKILIVEDEP KTGDYLKQGL GEAGFVVDLL RDGTDGLHHA LTEDYDLAIL DVMLPGMDGW
AVLAGIRKAG KDMPVLFLSA RDHVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGG
KGSSTEFLRA ADLELDLLRR RVTRAGKRID LTSKEFALLE LLLRRQDEVL PRSLIASQVW
DMNFDSDTNV IEVAMRRLRA KVDDNFEPKL IRTVRGMGYV LESPACA
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